Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB2O95900 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.1■□□□□ 0.65
TRUB2O95900 REXO1L9P-201ENST00000604264 2108 ntBASIC19.1■□□□□ 0.65
TRUB2O95900 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB2O95900 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB2O95900 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB2O95900 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.1■□□□□ 0.65
TRUB2O95900 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB2O95900 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
TRUB2O95900 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB2O95900 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB2O95900 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB2O95900 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB2O95900 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB2O95900 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
TRUB2O95900 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TRUB2O95900 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB2O95900 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB2O95900 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB2O95900 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB2O95900 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB2O95900 SPDYE13P-201ENST00000445314 798 ntBASIC19.09■□□□□ 0.65
TRUB2O95900 VENTXP5-201ENST00000523979 775 ntBASIC19.09■□□□□ 0.65
TRUB2O95900 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.09■□□□□ 0.65
TRUB2O95900 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.09■□□□□ 0.65
TRUB2O95900 LINC01126-201ENST00000623515 1646 ntBASIC19.09■□□□□ 0.65
TRUB2O95900 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.09■□□□□ 0.65
TRUB2O95900 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
TRUB2O95900 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.09■□□□□ 0.65
TRUB2O95900 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB2O95900 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB2O95900 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB2O95900 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB2O95900 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
TRUB2O95900 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.08■□□□□ 0.65
TRUB2O95900 AL096828.2-201ENST00000567259 1965 ntBASIC19.08■□□□□ 0.65
TRUB2O95900 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.08■□□□□ 0.65
TRUB2O95900 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.08■□□□□ 0.65
TRUB2O95900 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRUB2O95900 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
TRUB2O95900 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRUB2O95900 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.08■□□□□ 0.65
TRUB2O95900 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRUB2O95900 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRUB2O95900 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRUB2O95900 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.08■□□□□ 0.64
TRUB2O95900 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.08■□□□□ 0.64
TRUB2O95900 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRUB2O95900 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TRUB2O95900 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.08■□□□□ 0.64
TRUB2O95900 AL121956.5-201ENST00000625261 221 ntBASIC19.08■□□□□ 0.64
TRUB2O95900 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRUB2O95900 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TRUB2O95900 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRUB2O95900 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRUB2O95900 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRUB2O95900 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TRUB2O95900 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TRUB2O95900 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.08■□□□□ 0.64
TRUB2O95900 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRUB2O95900 NOC2LP2-201ENST00000407594 1944 ntBASIC19.08■□□□□ 0.64
TRUB2O95900 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB2O95900 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB2O95900 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB2O95900 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB2O95900 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.07■□□□□ 0.64
TRUB2O95900 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.07■□□□□ 0.64
TRUB2O95900 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB2O95900 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB2O95900 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB2O95900 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB2O95900 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB2O95900 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
TRUB2O95900 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.07■□□□□ 0.64
TRUB2O95900 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB2O95900 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.07■□□□□ 0.64
TRUB2O95900 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.07■□□□□ 0.64
TRUB2O95900 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TRUB2O95900 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.07■□□□□ 0.64
TRUB2O95900 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TRUB2O95900 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB2O95900 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB2O95900 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB2O95900 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB2O95900 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB2O95900 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB2O95900 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB2O95900 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB2O95900 AL024508.2-201ENST00000607749 1894 ntBASIC19.07■□□□□ 0.64
TRUB2O95900 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB2O95900 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.07■□□□□ 0.64
TRUB2O95900 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB2O95900 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB2O95900 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB2O95900 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB2O95900 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB2O95900 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.06■□□□□ 0.64
TRUB2O95900 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TRUB2O95900 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB2O95900 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms