Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.54■□□□□ 0.72
CSPG5O95196 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.54■□□□□ 0.72
CSPG5O95196 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CSPG5O95196 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.54■□□□□ 0.72
CSPG5O95196 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CSPG5O95196 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CSPG5O95196 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.54■□□□□ 0.72
CSPG5O95196 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
CSPG5O95196 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSPG5O95196 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CSPG5O95196 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.54■□□□□ 0.72
CSPG5O95196 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSPG5O95196 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CSPG5O95196 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.54■□□□□ 0.72
CSPG5O95196 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.54■□□□□ 0.72
CSPG5O95196 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CSPG5O95196 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSPG5O95196 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CSPG5O95196 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSPG5O95196 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CSPG5O95196 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSPG5O95196 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CSPG5O95196 HTR7P1-202ENST00000624664 4411 ntBASIC19.53■□□□□ 0.72
CSPG5O95196 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSPG5O95196 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSPG5O95196 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSPG5O95196 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSPG5O95196 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSPG5O95196 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSPG5O95196 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSPG5O95196 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.53■□□□□ 0.72
CSPG5O95196 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.53■□□□□ 0.72
CSPG5O95196 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.53■□□□□ 0.72
CSPG5O95196 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSPG5O95196 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.53■□□□□ 0.72
CSPG5O95196 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CSPG5O95196 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.53■□□□□ 0.72
CSPG5O95196 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CSPG5O95196 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.53■□□□□ 0.72
CSPG5O95196 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
CSPG5O95196 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CSPG5O95196 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSPG5O95196 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSPG5O95196 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSPG5O95196 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSPG5O95196 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CSPG5O95196 AL357033.4-201ENST00000617703 1807 ntBASIC19.53■□□□□ 0.72
CSPG5O95196 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSPG5O95196 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CSPG5O95196 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSPG5O95196 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CSPG5O95196 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.52■□□□□ 0.72
CSPG5O95196 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.52■□□□□ 0.72
CSPG5O95196 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CSPG5O95196 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.52■□□□□ 0.72
CSPG5O95196 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSPG5O95196 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSPG5O95196 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CSPG5O95196 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.52■□□□□ 0.72
CSPG5O95196 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSPG5O95196 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CSPG5O95196 AC092183.1-201ENST00000469884 875 ntBASIC19.52■□□□□ 0.72
CSPG5O95196 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CSPG5O95196 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CSPG5O95196 AC106730.1-201ENST00000566722 1090 ntBASIC19.52■□□□□ 0.72
CSPG5O95196 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.52■□□□□ 0.72
CSPG5O95196 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CSPG5O95196 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSPG5O95196 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.52■□□□□ 0.72
CSPG5O95196 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CSPG5O95196 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CSPG5O95196 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CSPG5O95196 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CSPG5O95196 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CSPG5O95196 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CSPG5O95196 PMS2P7-201ENST00000506558 1336 ntBASIC19.51■□□□□ 0.71
CSPG5O95196 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CSPG5O95196 KRT8P50-201ENST00000562022 1438 ntBASIC19.51■□□□□ 0.71
CSPG5O95196 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CSPG5O95196 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.51■□□□□ 0.71
CSPG5O95196 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.51■□□□□ 0.71
CSPG5O95196 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSPG5O95196 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSPG5O95196 RCN1P2-201ENST00000398357 915 ntBASIC19.51■□□□□ 0.71
CSPG5O95196 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.51■□□□□ 0.71
CSPG5O95196 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.51■□□□□ 0.71
CSPG5O95196 RNPS1P1-201ENST00000507437 918 ntBASIC19.51■□□□□ 0.71
CSPG5O95196 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSPG5O95196 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.51■□□□□ 0.71
CSPG5O95196 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.51■□□□□ 0.71
CSPG5O95196 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.51■□□□□ 0.71
CSPG5O95196 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.51■□□□□ 0.71
CSPG5O95196 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.51■□□□□ 0.71
CSPG5O95196 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.51■□□□□ 0.71
CSPG5O95196 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.51■□□□□ 0.71
CSPG5O95196 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CSPG5O95196 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSPG5O95196 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.51■□□□□ 0.71
CSPG5O95196 AC114341.1-201ENST00000618070 349 ntBASIC19.51■□□□□ 0.71
CSPG5O95196 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms