Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 AL121772.3-201ENST00000610840 674 ntBASIC18.62■□□□□ 0.57
SYNCRIPO60506 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.62■□□□□ 0.57
SYNCRIPO60506 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.62■□□□□ 0.57
SYNCRIPO60506 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SYNCRIPO60506 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNCRIPO60506 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNCRIPO60506 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SYNCRIPO60506 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNCRIPO60506 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.62■□□□□ 0.57
SYNCRIPO60506 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNCRIPO60506 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNCRIPO60506 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SYNCRIPO60506 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SYNCRIPO60506 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SYNCRIPO60506 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNCRIPO60506 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.62■□□□□ 0.57
SYNCRIPO60506 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNCRIPO60506 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNCRIPO60506 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SYNCRIPO60506 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNCRIPO60506 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNCRIPO60506 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SYNCRIPO60506 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.61■□□□□ 0.57
SYNCRIPO60506 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SYNCRIPO60506 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNCRIPO60506 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SYNCRIPO60506 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.61■□□□□ 0.57
SYNCRIPO60506 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.61■□□□□ 0.57
SYNCRIPO60506 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNCRIPO60506 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.61■□□□□ 0.57
SYNCRIPO60506 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SYNCRIPO60506 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
SYNCRIPO60506 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
SYNCRIPO60506 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.61■□□□□ 0.57
SYNCRIPO60506 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.61■□□□□ 0.57
SYNCRIPO60506 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.61■□□□□ 0.57
SYNCRIPO60506 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SYNCRIPO60506 AC104819.1-201ENST00000504587 486 ntBASIC18.61■□□□□ 0.57
SYNCRIPO60506 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.61■□□□□ 0.57
SYNCRIPO60506 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.61■□□□□ 0.57
SYNCRIPO60506 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SYNCRIPO60506 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNCRIPO60506 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SYNCRIPO60506 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
SYNCRIPO60506 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNCRIPO60506 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SYNCRIPO60506 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNCRIPO60506 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNCRIPO60506 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SYNCRIPO60506 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNCRIPO60506 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNCRIPO60506 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNCRIPO60506 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNCRIPO60506 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.6■□□□□ 0.57
SYNCRIPO60506 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNCRIPO60506 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SYNCRIPO60506 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.6■□□□□ 0.57
SYNCRIPO60506 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
SYNCRIPO60506 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SYNCRIPO60506 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNCRIPO60506 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SYNCRIPO60506 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNCRIPO60506 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNCRIPO60506 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.6■□□□□ 0.57
SYNCRIPO60506 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNCRIPO60506 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNCRIPO60506 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNCRIPO60506 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SYNCRIPO60506 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SYNCRIPO60506 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.6■□□□□ 0.57
SYNCRIPO60506 AL845331.1-201ENST00000424978 1190 ntBASIC18.6■□□□□ 0.57
SYNCRIPO60506 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.6■□□□□ 0.57
SYNCRIPO60506 AC091304.2-201ENST00000564639 760 ntBASIC18.6■□□□□ 0.57
SYNCRIPO60506 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.6■□□□□ 0.57
SYNCRIPO60506 Z69720.1-201ENST00000601483 472 ntBASIC18.6■□□□□ 0.57
SYNCRIPO60506 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.6■□□□□ 0.57
SYNCRIPO60506 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNCRIPO60506 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNCRIPO60506 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNCRIPO60506 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
SYNCRIPO60506 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNCRIPO60506 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNCRIPO60506 MTMR9LP-203ENST00000426597 1545 ntBASIC18.59■□□□□ 0.57
SYNCRIPO60506 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SYNCRIPO60506 AL163051.1-201ENST00000569214 1512 ntBASIC18.59■□□□□ 0.57
SYNCRIPO60506 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SYNCRIPO60506 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SYNCRIPO60506 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SYNCRIPO60506 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNCRIPO60506 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNCRIPO60506 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNCRIPO60506 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNCRIPO60506 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNCRIPO60506 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.59■□□□□ 0.57
SYNCRIPO60506 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.59■□□□□ 0.57
SYNCRIPO60506 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNCRIPO60506 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNCRIPO60506 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.59■□□□□ 0.57
SYNCRIPO60506 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNCRIPO60506 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms