Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SNX3O60493 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SNX3O60493 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNX3O60493 AP000593.1-201ENST00000393668 712 ntBASIC17.96■□□□□ 0.47
SNX3O60493 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNX3O60493 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SNX3O60493 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.96■□□□□ 0.47
SNX3O60493 AC034268.1-201ENST00000441047 882 ntBASIC17.96■□□□□ 0.47
SNX3O60493 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SNX3O60493 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.96■□□□□ 0.47
SNX3O60493 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.96■□□□□ 0.47
SNX3O60493 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNX3O60493 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SNX3O60493 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNX3O60493 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.96■□□□□ 0.47
SNX3O60493 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SNX3O60493 AC120498.8-201ENST00000614275 531 ntBASIC17.96■□□□□ 0.47
SNX3O60493 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.96■□□□□ 0.47
SNX3O60493 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.96■□□□□ 0.47
SNX3O60493 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.96■□□□□ 0.47
SNX3O60493 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNX3O60493 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
SNX3O60493 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNX3O60493 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SNX3O60493 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.96■□□□□ 0.46
SNX3O60493 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX3O60493 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNX3O60493 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNX3O60493 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX3O60493 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SNX3O60493 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX3O60493 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX3O60493 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX3O60493 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.95■□□□□ 0.46
SNX3O60493 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX3O60493 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNX3O60493 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.95■□□□□ 0.46
SNX3O60493 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX3O60493 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.95■□□□□ 0.46
SNX3O60493 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX3O60493 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX3O60493 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.95■□□□□ 0.46
SNX3O60493 Z85996.1-201ENST00000494644 937 ntBASIC17.95■□□□□ 0.46
SNX3O60493 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX3O60493 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX3O60493 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX3O60493 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SNX3O60493 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX3O60493 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX3O60493 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
SNX3O60493 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX3O60493 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX3O60493 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
SNX3O60493 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
SNX3O60493 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX3O60493 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNX3O60493 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX3O60493 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNX3O60493 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX3O60493 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SNX3O60493 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX3O60493 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX3O60493 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SNX3O60493 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.94■□□□□ 0.46
SNX3O60493 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.94■□□□□ 0.46
SNX3O60493 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX3O60493 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.94■□□□□ 0.46
SNX3O60493 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX3O60493 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SNX3O60493 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
SNX3O60493 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX3O60493 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX3O60493 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX3O60493 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX3O60493 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.94■□□□□ 0.46
SNX3O60493 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX3O60493 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX3O60493 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX3O60493 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX3O60493 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SNX3O60493 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SNX3O60493 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.93■□□□□ 0.46
SNX3O60493 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNX3O60493 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX3O60493 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNX3O60493 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.93■□□□□ 0.46
SNX3O60493 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX3O60493 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX3O60493 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.93■□□□□ 0.46
SNX3O60493 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.93■□□□□ 0.46
SNX3O60493 PRSS44-201ENST00000515154 1146 ntBASIC17.93■□□□□ 0.46
SNX3O60493 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNX3O60493 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.93■□□□□ 0.46
SNX3O60493 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.93■□□□□ 0.46
SNX3O60493 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.93■□□□□ 0.46
SNX3O60493 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX3O60493 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX3O60493 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX3O60493 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNX3O60493 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms