Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSSCA1O60232 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSSCA1O60232 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SSSCA1O60232 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSSCA1O60232 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
SSSCA1O60232 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.89□□□□□ -0.03
SSSCA1O60232 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.89□□□□□ -0.03
SSSCA1O60232 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.89□□□□□ -0.03
SSSCA1O60232 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.89□□□□□ -0.03
SSSCA1O60232 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC14.89□□□□□ -0.03
SSSCA1O60232 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.89□□□□□ -0.03
SSSCA1O60232 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.89□□□□□ -0.03
SSSCA1O60232 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.89□□□□□ -0.03
SSSCA1O60232 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.89□□□□□ -0.03
SSSCA1O60232 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SSSCA1O60232 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSSCA1O60232 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSSCA1O60232 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.89□□□□□ -0.03
SSSCA1O60232 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SSSCA1O60232 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.89□□□□□ -0.03
SSSCA1O60232 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SSSCA1O60232 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.89□□□□□ -0.03
SSSCA1O60232 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSSCA1O60232 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.89□□□□□ -0.03
SSSCA1O60232 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSSCA1O60232 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SSSCA1O60232 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSSCA1O60232 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SSSCA1O60232 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.88□□□□□ -0.03
SSSCA1O60232 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SSSCA1O60232 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.88□□□□□ -0.03
SSSCA1O60232 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.88□□□□□ -0.03
SSSCA1O60232 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.88□□□□□ -0.03
SSSCA1O60232 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
SSSCA1O60232 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.88□□□□□ -0.03
SSSCA1O60232 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.88□□□□□ -0.03
SSSCA1O60232 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SSSCA1O60232 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.88□□□□□ -0.03
SSSCA1O60232 AC097658.1-201ENST00000475555 843 ntBASIC14.88□□□□□ -0.03
SSSCA1O60232 Z85996.1-201ENST00000494644 937 ntBASIC14.88□□□□□ -0.03
SSSCA1O60232 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 AC004264.1-201ENST00000608354 794 ntBASIC14.88□□□□□ -0.03
SSSCA1O60232 AC080038.1-201ENST00000611274 1154 ntBASIC14.88□□□□□ -0.03
SSSCA1O60232 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.88□□□□□ -0.03
SSSCA1O60232 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.88□□□□□ -0.03
SSSCA1O60232 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
SSSCA1O60232 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.88□□□□□ -0.03
SSSCA1O60232 AC006116.8-202ENST00000587620 1550 ntBASIC14.88□□□□□ -0.03
SSSCA1O60232 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SSSCA1O60232 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.88□□□□□ -0.03
SSSCA1O60232 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 NBPF21P-201ENST00000425093 1451 ntBASIC14.88□□□□□ -0.03
SSSCA1O60232 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.88□□□□□ -0.03
SSSCA1O60232 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSSCA1O60232 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSSCA1O60232 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SSSCA1O60232 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSSCA1O60232 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.87□□□□□ -0.03
SSSCA1O60232 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
SSSCA1O60232 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSSCA1O60232 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSSCA1O60232 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SSSCA1O60232 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSSCA1O60232 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.87□□□□□ -0.03
SSSCA1O60232 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSSCA1O60232 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.87□□□□□ -0.03
SSSCA1O60232 AC022211.2-201ENST00000585075 2527 ntBASIC14.87□□□□□ -0.03
SSSCA1O60232 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SSSCA1O60232 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSSCA1O60232 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SSSCA1O60232 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
SSSCA1O60232 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SSSCA1O60232 PRSS44-201ENST00000515154 1146 ntBASIC14.87□□□□□ -0.03
SSSCA1O60232 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SSSCA1O60232 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.87□□□□□ -0.03
SSSCA1O60232 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.87□□□□□ -0.03
SSSCA1O60232 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSSCA1O60232 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.87□□□□□ -0.03
SSSCA1O60232 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.87□□□□□ -0.03
SSSCA1O60232 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms