Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC188H7C350 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC188H7C350 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC188H7C350 MIR3180-5-201ENST00000583743 153 ntBASIC18.96■□□□□ 0.63
CCDC188H7C350 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.96■□□□□ 0.63
CCDC188H7C350 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC188H7C350 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC188H7C350 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC188H7C350 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC188H7C350 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC188H7C350 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
CCDC188H7C350 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC188H7C350 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC188H7C350 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC188H7C350 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC188H7C350 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC188H7C350 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC188H7C350 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC188H7C350 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
CCDC188H7C350 AD000864.1-201ENST00000624076 2295 ntBASIC18.95■□□□□ 0.62
CCDC188H7C350 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC188H7C350 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC188H7C350 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CCDC188H7C350 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC188H7C350 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCDC188H7C350 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC188H7C350 AC036111.1-201ENST00000533973 1582 ntBASIC18.95■□□□□ 0.62
CCDC188H7C350 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC188H7C350 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC188H7C350 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC188H7C350 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC188H7C350 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC188H7C350 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC188H7C350 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC188H7C350 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC188H7C350 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC188H7C350 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC188H7C350 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC188H7C350 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC188H7C350 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.95■□□□□ 0.62
CCDC188H7C350 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC188H7C350 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC188H7C350 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC188H7C350 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CCDC188H7C350 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC188H7C350 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC188H7C350 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC188H7C350 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC188H7C350 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
CCDC188H7C350 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC188H7C350 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC188H7C350 AC096733.2-201ENST00000609937 1394 ntBASIC18.94■□□□□ 0.62
CCDC188H7C350 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC188H7C350 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC188H7C350 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC188H7C350 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.94■□□□□ 0.62
CCDC188H7C350 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC188H7C350 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCDC188H7C350 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC188H7C350 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC188H7C350 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCDC188H7C350 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC188H7C350 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC188H7C350 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.94■□□□□ 0.62
CCDC188H7C350 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC188H7C350 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CCDC188H7C350 AC073195.1-201ENST00000607241 877 ntBASIC18.94■□□□□ 0.62
CCDC188H7C350 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC188H7C350 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC188H7C350 FSCN1P1-201ENST00000568912 1481 ntBASIC18.94■□□□□ 0.62
CCDC188H7C350 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC188H7C350 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC188H7C350 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC188H7C350 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC188H7C350 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC188H7C350 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC188H7C350 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC188H7C350 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC188H7C350 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC188H7C350 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC188H7C350 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC188H7C350 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC188H7C350 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC188H7C350 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC188H7C350 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC188H7C350 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC188H7C350 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC188H7C350 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCDC188H7C350 HOXB1-202ENST00000577092 1414 ntBASIC18.93■□□□□ 0.62
CCDC188H7C350 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC188H7C350 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC188H7C350 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC188H7C350 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC188H7C350 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC188H7C350 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC188H7C350 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC188H7C350 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC188H7C350 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC188H7C350 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC188H7C350 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms