Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.45
CSNK1G3Q9Y6M4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.45
CSNK1G3Q9Y6M4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSNK1G3Q9Y6M4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
CSNK1G3Q9Y6M4 AC112777.1-201ENST00000540175 1423 ntBASIC17.83■□□□□ 0.45
CSNK1G3Q9Y6M4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CSNK1G3Q9Y6M4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSNK1G3Q9Y6M4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CSNK1G3Q9Y6M4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1G3Q9Y6M4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 AL161938.1-201ENST00000569833 2180 ntBASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 SAPCD2P3-201ENST00000455031 850 ntBASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 REXO1L6P-202ENST00000619970 1078 ntBASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.82■□□□□ 0.44
CSNK1G3Q9Y6M4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 AC091607.1-201ENST00000490318 1060 ntBASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms