Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 PGM5P2-202ENST00000637225 1043 ntBASIC7.43□□□□□ -1.22
MACF1Q9UPN3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
MACF1Q9UPN3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC7.43□□□□□ -1.22
MACF1Q9UPN3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC7.43□□□□□ -1.22
MACF1Q9UPN3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC7.43□□□□□ -1.22
MACF1Q9UPN3 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC7.43□□□□□ -1.22
MACF1Q9UPN3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC7.43□□□□□ -1.22
MACF1Q9UPN3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC7.43□□□□□ -1.22
MACF1Q9UPN3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC7.43□□□□□ -1.22
MACF1Q9UPN3 AC004706.3-202ENST00000621574 984 ntBASIC7.43□□□□□ -1.22
MACF1Q9UPN3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC7.42□□□□□ -1.22
MACF1Q9UPN3 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC7.42□□□□□ -1.22
MACF1Q9UPN3 SPCS2P4-201ENST00000436160 681 ntBASIC7.42□□□□□ -1.22
MACF1Q9UPN3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 AL109659.2-201ENST00000606809 1674 ntBASIC7.42□□□□□ -1.22
MACF1Q9UPN3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 AL355306.1-201ENST00000415580 579 ntBASIC7.42□□□□□ -1.22
MACF1Q9UPN3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 AC069120.2-201ENST00000524091 540 ntBASIC7.42□□□□□ -1.22
MACF1Q9UPN3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 RHOQP3-201ENST00000437982 621 ntBASIC7.42□□□□□ -1.22
MACF1Q9UPN3 GOLGA2P4-201ENST00000441462 777 ntBASIC7.42□□□□□ -1.22
MACF1Q9UPN3 AL158211.3-201ENST00000607385 239 ntBASIC7.42□□□□□ -1.22
MACF1Q9UPN3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
MACF1Q9UPN3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 ZNF767P-206ENST00000513792 565 ntBASIC7.41□□□□□ -1.22
MACF1Q9UPN3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 KRT8P23-201ENST00000560090 1207 ntBASIC7.41□□□□□ -1.22
MACF1Q9UPN3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 AC244015.2-201ENST00000616358 1861 ntBASIC7.41□□□□□ -1.22
MACF1Q9UPN3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 AC026150.2-201ENST00000564693 1156 ntBASIC7.41□□□□□ -1.22
MACF1Q9UPN3 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 AC098614.1-201ENST00000368528 745 ntBASIC7.41□□□□□ -1.22
MACF1Q9UPN3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 AL512638.1-201ENST00000457493 794 ntBASIC7.41□□□□□ -1.22
MACF1Q9UPN3 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC7.41□□□□□ -1.22
MACF1Q9UPN3 AP001059.3-201ENST00000619053 235 ntBASIC7.41□□□□□ -1.22
MACF1Q9UPN3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms