Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HDAC9Q9UKV0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.81■■□□□ 1.08
HDAC9Q9UKV0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.81■■□□□ 1.08
HDAC9Q9UKV0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC21.81■■□□□ 1.08
HDAC9Q9UKV0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.81■■□□□ 1.08
HDAC9Q9UKV0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HDAC9Q9UKV0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.81■■□□□ 1.08
HDAC9Q9UKV0 AL138831.2-201ENST00000606564 490 ntBASIC21.81■■□□□ 1.08
HDAC9Q9UKV0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.81■■□□□ 1.08
HDAC9Q9UKV0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.81■■□□□ 1.08
HDAC9Q9UKV0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.81■■□□□ 1.08
HDAC9Q9UKV0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.81■■□□□ 1.08
HDAC9Q9UKV0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HDAC9Q9UKV0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HDAC9Q9UKV0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.81■■□□□ 1.08
HDAC9Q9UKV0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HDAC9Q9UKV0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
HDAC9Q9UKV0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 MIR940-201ENST00000401276 94 ntBASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 AC011467.2-201ENST00000598425 242 ntBASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 AC116407.3-201ENST00000623905 1129 ntBASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC9Q9UKV0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 HNRNPDP1-201ENST00000439535 754 ntBASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 AL355385.1-201ENST00000606123 409 ntBASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 AL139424.1-201ENST00000607572 797 ntBASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC9Q9UKV0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 AL161938.1-201ENST00000569833 2180 ntBASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 AC007952.6-201ENST00000573168 2673 ntBASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 AC003957.1-201ENST00000625108 2673 ntBASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 AC125634.1-201ENST00000438758 1403 ntBASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 AP005117.1-201ENST00000584346 1413 ntBASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HDAC9Q9UKV0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HDAC9Q9UKV0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.77■■□□□ 1.08
HDAC9Q9UKV0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HDAC9Q9UKV0 AC099343.3-201ENST00000605834 2503 ntBASIC21.77■■□□□ 1.08
HDAC9Q9UKV0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.77■■□□□ 1.08
HDAC9Q9UKV0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
HDAC9Q9UKV0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
HDAC9Q9UKV0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HDAC9Q9UKV0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.08
HDAC9Q9UKV0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HDAC9Q9UKV0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms