Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 AL023806.1-201ENST00000603994 1649 ntBASIC17.69■□□□□ 0.42
NDE1Q9NXR1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 KRT18P41-201ENST00000518924 1277 ntBASIC17.69■□□□□ 0.42
NDE1Q9NXR1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 C1QL1P1-201ENST00000568105 661 ntBASIC17.69■□□□□ 0.42
NDE1Q9NXR1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 AL096828.2-201ENST00000567259 1965 ntBASIC17.69■□□□□ 0.42
NDE1Q9NXR1 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 POU5F1P3-201ENST00000428824 1078 ntBASIC17.68■□□□□ 0.42
NDE1Q9NXR1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 GMCL1P1-201ENST00000463439 1581 ntBASIC17.68■□□□□ 0.42
NDE1Q9NXR1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 HLA-B-256ENST00000639848 1089 ntBASIC17.68■□□□□ 0.42
NDE1Q9NXR1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 HTR7P1-201ENST00000538670 1336 ntBASIC17.68■□□□□ 0.42
NDE1Q9NXR1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NDE1Q9NXR1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 PRSS44-201ENST00000515154 1146 ntBASIC17.67■□□□□ 0.42
NDE1Q9NXR1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 MIR6821-201ENST00000617625 74 ntBASIC17.67■□□□□ 0.42
NDE1Q9NXR1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 AP001094.4-201ENST00000579008 2176 ntBASIC17.67■□□□□ 0.42
NDE1Q9NXR1 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDE1Q9NXR1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDE1Q9NXR1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDE1Q9NXR1 AC006116.8-202ENST00000587620 1550 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms