Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 SPDYE15P-201ENST00000424157 909 ntBASIC16.93■□□□□ 0.3
UBQLN3Q9H347 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.93■□□□□ 0.3
UBQLN3Q9H347 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 AC024243.1-201ENST00000609234 778 ntBASIC16.93■□□□□ 0.3
UBQLN3Q9H347 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
UBQLN3Q9H347 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 HYMAI.1-201ENST00000620949 238 ntBASIC16.92■□□□□ 0.3
UBQLN3Q9H347 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN3Q9H347 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
UBQLN3Q9H347 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN3Q9H347 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN3Q9H347 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN3Q9H347 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.91■□□□□ 0.3
UBQLN3Q9H347 AL671277.2-201ENST00000458060 996 ntBASIC16.91■□□□□ 0.3
UBQLN3Q9H347 AC034232.1-201ENST00000506026 1064 ntBASIC16.91■□□□□ 0.3
UBQLN3Q9H347 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.91■□□□□ 0.3
UBQLN3Q9H347 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.91■□□□□ 0.3
UBQLN3Q9H347 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.91■□□□□ 0.3
UBQLN3Q9H347 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
UBQLN3Q9H347 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.91■□□□□ 0.3
UBQLN3Q9H347 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
UBQLN3Q9H347 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.91■□□□□ 0.3
UBQLN3Q9H347 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN3Q9H347 AC034236.2-201ENST00000606662 1610 ntBASIC16.91■□□□□ 0.3
UBQLN3Q9H347 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN3Q9H347 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN3Q9H347 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.91■□□□□ 0.3
UBQLN3Q9H347 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.91■□□□□ 0.3
UBQLN3Q9H347 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN3Q9H347 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.91■□□□□ 0.3
UBQLN3Q9H347 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN3Q9H347 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN3Q9H347 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 AC112907.2-201ENST00000448639 330 ntBASIC16.9■□□□□ 0.3
UBQLN3Q9H347 RASA4DP-201ENST00000460726 1199 ntBASIC16.9■□□□□ 0.3
UBQLN3Q9H347 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 AL121956.5-201ENST00000625261 221 ntBASIC16.9■□□□□ 0.3
UBQLN3Q9H347 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms