Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 AC079602.3-201ENST00000623931 403 ntBASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 NOC2LP2-201ENST00000407594 1944 ntBASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 AL133373.2-201ENST00000623187 2828 ntBASIC18.82■□□□□ 0.6
CSPG4P5Q96PW8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 FLJ13224-201ENST00000313737 1514 ntBASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 STARP1-201ENST00000397973 869 ntBASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG4P5Q96PW8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 RCN1P1-201ENST00000400413 996 ntBASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG4P5Q96PW8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG4P5Q96PW8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.79■□□□□ 0.6
CSPG4P5Q96PW8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG4P5Q96PW8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG4P5Q96PW8 AP000997.3-201ENST00000623333 2250 ntBASIC18.79■□□□□ 0.6
CSPG4P5Q96PW8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.79■□□□□ 0.6
CSPG4P5Q96PW8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG4P5Q96PW8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG4P5Q96PW8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG4P5Q96PW8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG4P5Q96PW8 AC008764.6-201ENST00000595909 2069 ntBASIC18.79■□□□□ 0.6
CSPG4P5Q96PW8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG4P5Q96PW8 RNF152P1-201ENST00000397754 604 ntBASIC18.79■□□□□ 0.6
CSPG4P5Q96PW8 TSPY5P-201ENST00000426936 936 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms