Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.31■□□□□ 0.68
CALR3Q96L12 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.31■□□□□ 0.68
CALR3Q96L12 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.31■□□□□ 0.68
CALR3Q96L12 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALR3Q96L12 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CALR3Q96L12 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALR3Q96L12 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALR3Q96L12 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALR3Q96L12 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CALR3Q96L12 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALR3Q96L12 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALR3Q96L12 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALR3Q96L12 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.3■□□□□ 0.68
CALR3Q96L12 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.3■□□□□ 0.68
CALR3Q96L12 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALR3Q96L12 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.3■□□□□ 0.68
CALR3Q96L12 AC139713.2-201ENST00000641328 2723 ntBASIC19.3■□□□□ 0.68
CALR3Q96L12 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CALR3Q96L12 CRYGFP-201ENST00000418459 633 ntBASIC19.3■□□□□ 0.68
CALR3Q96L12 KRT18P23-201ENST00000435622 1283 ntBASIC19.3■□□□□ 0.68
CALR3Q96L12 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CALR3Q96L12 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CALR3Q96L12 AL353719.1-201ENST00000566847 864 ntBASIC19.3■□□□□ 0.68
CALR3Q96L12 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.3■□□□□ 0.68
CALR3Q96L12 AC233702.5-201ENST00000584107 538 ntBASIC19.3■□□□□ 0.68
CALR3Q96L12 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CALR3Q96L12 AL023803.3-201ENST00000615559 522 ntBASIC19.3■□□□□ 0.68
CALR3Q96L12 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALR3Q96L12 AC006116.8-202ENST00000587620 1550 ntBASIC19.3■□□□□ 0.68
CALR3Q96L12 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALR3Q96L12 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALR3Q96L12 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CALR3Q96L12 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALR3Q96L12 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALR3Q96L12 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CALR3Q96L12 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CALR3Q96L12 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CALR3Q96L12 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CALR3Q96L12 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CALR3Q96L12 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALR3Q96L12 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALR3Q96L12 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALR3Q96L12 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CALR3Q96L12 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CALR3Q96L12 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CALR3Q96L12 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CALR3Q96L12 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CALR3Q96L12 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CALR3Q96L12 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CALR3Q96L12 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CALR3Q96L12 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.29■□□□□ 0.68
CALR3Q96L12 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CALR3Q96L12 AC012317.2-201ENST00000623305 2251 ntBASIC19.29■□□□□ 0.68
CALR3Q96L12 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CALR3Q96L12 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.29■□□□□ 0.68
CALR3Q96L12 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.29■□□□□ 0.68
CALR3Q96L12 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CALR3Q96L12 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.29■□□□□ 0.68
CALR3Q96L12 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.29■□□□□ 0.68
CALR3Q96L12 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.29■□□□□ 0.68
CALR3Q96L12 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.29■□□□□ 0.68
CALR3Q96L12 REXO1L10P-201ENST00000615707 1290 ntBASIC19.29■□□□□ 0.68
CALR3Q96L12 REXO1L12P-201ENST00000622156 912 ntBASIC19.29■□□□□ 0.68
CALR3Q96L12 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.29■□□□□ 0.68
CALR3Q96L12 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CALR3Q96L12 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CALR3Q96L12 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.29■□□□□ 0.68
CALR3Q96L12 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CALR3Q96L12 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
CALR3Q96L12 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CALR3Q96L12 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CALR3Q96L12 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALR3Q96L12 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALR3Q96L12 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CALR3Q96L12 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CALR3Q96L12 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.28■□□□□ 0.68
CALR3Q96L12 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CALR3Q96L12 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALR3Q96L12 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CALR3Q96L12 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALR3Q96L12 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALR3Q96L12 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALR3Q96L12 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CALR3Q96L12 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALR3Q96L12 KRT18P29-201ENST00000397031 1267 ntBASIC19.28■□□□□ 0.68
CALR3Q96L12 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.28■□□□□ 0.68
CALR3Q96L12 DUTP2-201ENST00000519164 463 ntBASIC19.28■□□□□ 0.68
CALR3Q96L12 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.28■□□□□ 0.68
CALR3Q96L12 AC104390.1-201ENST00000555663 520 ntBASIC19.28■□□□□ 0.68
CALR3Q96L12 MIR4674-201ENST00000582457 87 ntBASIC19.28■□□□□ 0.68
CALR3Q96L12 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.28■□□□□ 0.68
CALR3Q96L12 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALR3Q96L12 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.28■□□□□ 0.68
CALR3Q96L12 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALR3Q96L12 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
CALR3Q96L12 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALR3Q96L12 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CALR3Q96L12 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CALR3Q96L12 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.28■□□□□ 0.68
CALR3Q96L12 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms