Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ECHDC3Q96DC8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
ECHDC3Q96DC8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 AC104581.1-202ENST00000635932 2618 ntBASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 TSPY12P-201ENST00000421279 868 ntBASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 KRT18P65-201ENST00000439811 1286 ntBASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 TPSP2-201ENST00000561760 610 ntBASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 IGHV3-41-201ENST00000613121 348 ntBASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ECHDC3Q96DC8 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 AC092119.3-201ENST00000612618 583 ntBASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 KRT18P1-202ENST00000452408 1331 ntBASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ECHDC3Q96DC8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 AL845331.1-201ENST00000424978 1190 ntBASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms