Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 BX664615.1-201ENST00000443558 458 ntBASIC17.56■□□□□ 0.4
UBE2E3Q969T4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
UBE2E3Q969T4 PHGDH-209ENST00000641074 1780 ntBASIC17.56■□□□□ 0.4
UBE2E3Q969T4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 PVRIG2P-201ENST00000435460 978 ntBASIC17.55■□□□□ 0.4
UBE2E3Q969T4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 AC010203.1-204ENST00000548782 407 ntBASIC17.55■□□□□ 0.4
UBE2E3Q969T4 LINC01023-201ENST00000606054 436 ntBASIC17.55■□□□□ 0.4
UBE2E3Q969T4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.55■□□□□ 0.4
UBE2E3Q969T4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 FLJ13224-201ENST00000313737 1514 ntBASIC17.54■□□□□ 0.4
UBE2E3Q969T4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 GCSHP2-201ENST00000560971 527 ntBASIC17.54■□□□□ 0.4
UBE2E3Q969T4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
UBE2E3Q969T4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 AL096828.2-201ENST00000567259 1965 ntBASIC17.53■□□□□ 0.4
UBE2E3Q969T4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 AL024508.2-201ENST00000607749 1894 ntBASIC17.53■□□□□ 0.4
UBE2E3Q969T4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 TERF1P1-201ENST00000311003 1181 ntBASIC17.53■□□□□ 0.4
UBE2E3Q969T4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms