Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ARHGEF28Q8N1W1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ARHGEF28Q8N1W1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ARHGEF28Q8N1W1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ARHGEF28Q8N1W1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ARHGEF28Q8N1W1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ARHGEF28Q8N1W1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ARHGEF28Q8N1W1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC25.16■■□□□ 1.62
ARHGEF28Q8N1W1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
ARHGEF28Q8N1W1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
ARHGEF28Q8N1W1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC25.16■■□□□ 1.62
ARHGEF28Q8N1W1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
ARHGEF28Q8N1W1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC25.16■■□□□ 1.62
ARHGEF28Q8N1W1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC25.16■■□□□ 1.62
ARHGEF28Q8N1W1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ARHGEF28Q8N1W1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ARHGEF28Q8N1W1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC25.16■■□□□ 1.62
ARHGEF28Q8N1W1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ARHGEF28Q8N1W1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ARHGEF28Q8N1W1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ARHGEF28Q8N1W1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
ARHGEF28Q8N1W1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
ARHGEF28Q8N1W1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC25.14■■□□□ 1.62
ARHGEF28Q8N1W1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
ARHGEF28Q8N1W1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC25.14■■□□□ 1.61
ARHGEF28Q8N1W1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ARHGEF28Q8N1W1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ARHGEF28Q8N1W1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
ARHGEF28Q8N1W1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC25.14■■□□□ 1.61
ARHGEF28Q8N1W1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC25.14■■□□□ 1.61
ARHGEF28Q8N1W1 AC073592.3-201ENST00000625118 1834 ntBASIC25.14■■□□□ 1.61
ARHGEF28Q8N1W1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC25.14■■□□□ 1.61
ARHGEF28Q8N1W1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
ARHGEF28Q8N1W1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC25.14■■□□□ 1.61
ARHGEF28Q8N1W1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
ARHGEF28Q8N1W1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ARHGEF28Q8N1W1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ARHGEF28Q8N1W1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
ARHGEF28Q8N1W1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC25.13■■□□□ 1.61
ARHGEF28Q8N1W1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ARHGEF28Q8N1W1 AC096633.1-201ENST00000422446 749 ntBASIC25.13■■□□□ 1.61
ARHGEF28Q8N1W1 RPS2P1-201ENST00000434010 821 ntBASIC25.13■■□□□ 1.61
ARHGEF28Q8N1W1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ARHGEF28Q8N1W1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC25.13■■□□□ 1.61
ARHGEF28Q8N1W1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
ARHGEF28Q8N1W1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
ARHGEF28Q8N1W1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC25.13■■□□□ 1.61
ARHGEF28Q8N1W1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC25.13■■□□□ 1.61
ARHGEF28Q8N1W1 SLC25A24-204ENST00000569674 2357 ntBASIC25.13■■□□□ 1.61
ARHGEF28Q8N1W1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ARHGEF28Q8N1W1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC25.13■■□□□ 1.61
ARHGEF28Q8N1W1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
ARHGEF28Q8N1W1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC25.13■■□□□ 1.61
ARHGEF28Q8N1W1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
ARHGEF28Q8N1W1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC25.12■■□□□ 1.61
ARHGEF28Q8N1W1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
ARHGEF28Q8N1W1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC25.12■■□□□ 1.61
ARHGEF28Q8N1W1 RNPS1P1-201ENST00000507437 918 ntBASIC25.12■■□□□ 1.61
ARHGEF28Q8N1W1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
ARHGEF28Q8N1W1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ARHGEF28Q8N1W1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC25.12■■□□□ 1.61
ARHGEF28Q8N1W1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC25.12■■□□□ 1.61
ARHGEF28Q8N1W1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
ARHGEF28Q8N1W1 AC098831.1-202ENST00000438821 336 ntBASIC25.12■■□□□ 1.61
ARHGEF28Q8N1W1 KRT18P58-201ENST00000527480 1120 ntBASIC25.12■■□□□ 1.61
ARHGEF28Q8N1W1 AC106730.1-201ENST00000566722 1090 ntBASIC25.12■■□□□ 1.61
ARHGEF28Q8N1W1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC25.12■■□□□ 1.61
ARHGEF28Q8N1W1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC25.12■■□□□ 1.61
ARHGEF28Q8N1W1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ARHGEF28Q8N1W1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ARHGEF28Q8N1W1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
ARHGEF28Q8N1W1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ARHGEF28Q8N1W1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC25.11■■□□□ 1.61
ARHGEF28Q8N1W1 AC079776.2-201ENST00000641154 1609 ntBASIC25.11■■□□□ 1.61
ARHGEF28Q8N1W1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
ARHGEF28Q8N1W1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC25.11■■□□□ 1.61
ARHGEF28Q8N1W1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC25.11■■□□□ 1.61
ARHGEF28Q8N1W1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC25.11■■□□□ 1.61
ARHGEF28Q8N1W1 FAM215A-202ENST00000632077 792 ntBASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms