Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 SIGLEC16-201ENST00000599858 1437 ntBASIC17.12■□□□□ 0.33
COL27A1Q8IZC6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
COL27A1Q8IZC6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL27A1Q8IZC6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COL27A1Q8IZC6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.12■□□□□ 0.33
COL27A1Q8IZC6 MIR940-201ENST00000401276 94 ntBASIC17.12■□□□□ 0.33
COL27A1Q8IZC6 AC096633.1-201ENST00000422446 749 ntBASIC17.12■□□□□ 0.33
COL27A1Q8IZC6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.12■□□□□ 0.33
COL27A1Q8IZC6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.12■□□□□ 0.33
COL27A1Q8IZC6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COL27A1Q8IZC6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.12■□□□□ 0.33
COL27A1Q8IZC6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 LAGE3P1-201ENST00000425356 484 ntBASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL27A1Q8IZC6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 PMPCAP1-201ENST00000508114 1576 ntBASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 AC009947.1-201ENST00000444350 727 ntBASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 AP001160.2-201ENST00000596071 487 ntBASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL27A1Q8IZC6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL27A1Q8IZC6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.09■□□□□ 0.33
COL27A1Q8IZC6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL27A1Q8IZC6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL27A1Q8IZC6 AC148477.5-201ENST00000625164 1645 ntBASIC17.09■□□□□ 0.33
COL27A1Q8IZC6 KRT18P3-201ENST00000451602 1288 ntBASIC17.09■□□□□ 0.33
COL27A1Q8IZC6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.09■□□□□ 0.33
COL27A1Q8IZC6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.09■□□□□ 0.33
COL27A1Q8IZC6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.09■□□□□ 0.33
COL27A1Q8IZC6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.09■□□□□ 0.33
COL27A1Q8IZC6 AL691403.2-201ENST00000618460 490 ntBASIC17.09■□□□□ 0.33
COL27A1Q8IZC6 AD001527.2-201ENST00000622994 785 ntBASIC17.09■□□□□ 0.33
COL27A1Q8IZC6 AC073592.4-201ENST00000623827 446 ntBASIC17.09■□□□□ 0.33
COL27A1Q8IZC6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL27A1Q8IZC6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL27A1Q8IZC6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL27A1Q8IZC6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
COL27A1Q8IZC6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
COL27A1Q8IZC6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.09■□□□□ 0.33
COL27A1Q8IZC6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
COL27A1Q8IZC6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.08■□□□□ 0.33
COL27A1Q8IZC6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL27A1Q8IZC6 AC093010.1-201ENST00000473625 1624 ntBASIC17.08■□□□□ 0.33
COL27A1Q8IZC6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms