Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 SAPCD2P3-201ENST00000455031 850 ntBASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 AC005336.2-201ENST00000593183 939 ntBASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC62Q6P9F0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 LINC01126-201ENST00000623515 1646 ntBASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 TSPY12P-201ENST00000421279 868 ntBASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 MIR5100-201ENST00000579544 119 ntBASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 AC087289.5-201ENST00000586076 3175 ntBASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 AIRN-201ENST00000601203 4374 ntBASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC62Q6P9F0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CCDC62Q6P9F0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms