Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.38■□□□□ 0.85
COL13A1Q5TAT6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL13A1Q5TAT6 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
COL13A1Q5TAT6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.38■□□□□ 0.85
COL13A1Q5TAT6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
COL13A1Q5TAT6 SPDYE21P-201ENST00000413323 827 ntBASIC20.38■□□□□ 0.85
COL13A1Q5TAT6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.38■□□□□ 0.85
COL13A1Q5TAT6 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL13A1Q5TAT6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL13A1Q5TAT6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
COL13A1Q5TAT6 MIR4259-201ENST00000584466 101 ntBASIC20.38■□□□□ 0.85
COL13A1Q5TAT6 AC068137.2-201ENST00000605408 478 ntBASIC20.38■□□□□ 0.85
COL13A1Q5TAT6 AL158211.3-201ENST00000607385 239 ntBASIC20.38■□□□□ 0.85
COL13A1Q5TAT6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.38■□□□□ 0.85
COL13A1Q5TAT6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
COL13A1Q5TAT6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.38■□□□□ 0.85
COL13A1Q5TAT6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
COL13A1Q5TAT6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 KRT17P8-201ENST00000540749 863 ntBASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL13A1Q5TAT6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 FAM58DP-201ENST00000428076 619 ntBASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 RAB43P1-201ENST00000561790 589 ntBASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 PFAS-212ENST00000625942 396 ntTSL 5 BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL13A1Q5TAT6 AC012676.1-201ENST00000574705 1949 ntBASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 CD74-212ENST00000524315 584 ntTSL 5 BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL13A1Q5TAT6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL13A1Q5TAT6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL13A1Q5TAT6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
COL13A1Q5TAT6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL13A1Q5TAT6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL13A1Q5TAT6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL13A1Q5TAT6 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.34■□□□□ 0.85
COL13A1Q5TAT6 INE1-201ENST00000456273 945 ntBASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms