Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VARS2Q5ST30 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VARS2Q5ST30 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.27■□□□□ 0.68
VARS2Q5ST30 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VARS2Q5ST30 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VARS2Q5ST30 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.27■□□□□ 0.68
VARS2Q5ST30 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.27■□□□□ 0.68
VARS2Q5ST30 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.27■□□□□ 0.68
VARS2Q5ST30 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.27■□□□□ 0.68
VARS2Q5ST30 AC096582.2-201ENST00000510860 516 ntBASIC19.27■□□□□ 0.68
VARS2Q5ST30 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.27■□□□□ 0.68
VARS2Q5ST30 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.27■□□□□ 0.68
VARS2Q5ST30 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VARS2Q5ST30 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VARS2Q5ST30 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.27■□□□□ 0.68
VARS2Q5ST30 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
VARS2Q5ST30 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.26■□□□□ 0.67
VARS2Q5ST30 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.26■□□□□ 0.67
VARS2Q5ST30 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VARS2Q5ST30 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
VARS2Q5ST30 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
VARS2Q5ST30 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
VARS2Q5ST30 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.26■□□□□ 0.67
VARS2Q5ST30 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VARS2Q5ST30 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
VARS2Q5ST30 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
VARS2Q5ST30 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VARS2Q5ST30 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.26■□□□□ 0.67
VARS2Q5ST30 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VARS2Q5ST30 MTCL1P1-201ENST00000446207 792 ntBASIC19.26■□□□□ 0.67
VARS2Q5ST30 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC19.26■□□□□ 0.67
VARS2Q5ST30 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VARS2Q5ST30 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.26■□□□□ 0.67
VARS2Q5ST30 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
VARS2Q5ST30 AL121912.1-201ENST00000603683 238 ntBASIC19.26■□□□□ 0.67
VARS2Q5ST30 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VARS2Q5ST30 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
VARS2Q5ST30 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VARS2Q5ST30 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VARS2Q5ST30 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VARS2Q5ST30 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VARS2Q5ST30 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VARS2Q5ST30 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VARS2Q5ST30 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VARS2Q5ST30 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VARS2Q5ST30 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VARS2Q5ST30 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.26■□□□□ 0.67
VARS2Q5ST30 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.26■□□□□ 0.67
VARS2Q5ST30 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.26■□□□□ 0.67
VARS2Q5ST30 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VARS2Q5ST30 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
VARS2Q5ST30 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VARS2Q5ST30 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VARS2Q5ST30 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VARS2Q5ST30 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VARS2Q5ST30 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VARS2Q5ST30 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.25■□□□□ 0.67
VARS2Q5ST30 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.25■□□□□ 0.67
VARS2Q5ST30 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VARS2Q5ST30 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.25■□□□□ 0.67
VARS2Q5ST30 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VARS2Q5ST30 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.25■□□□□ 0.67
VARS2Q5ST30 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VARS2Q5ST30 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.25■□□□□ 0.67
VARS2Q5ST30 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VARS2Q5ST30 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VARS2Q5ST30 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.25■□□□□ 0.67
VARS2Q5ST30 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.25■□□□□ 0.67
VARS2Q5ST30 AC098799.1-201ENST00000504752 800 ntBASIC19.25■□□□□ 0.67
VARS2Q5ST30 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VARS2Q5ST30 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.25■□□□□ 0.67
VARS2Q5ST30 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.25■□□□□ 0.67
VARS2Q5ST30 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
VARS2Q5ST30 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.25■□□□□ 0.67
VARS2Q5ST30 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
VARS2Q5ST30 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.25■□□□□ 0.67
VARS2Q5ST30 REXO1L6P-202ENST00000619970 1078 ntBASIC19.25■□□□□ 0.67
VARS2Q5ST30 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VARS2Q5ST30 AC126763.1-201ENST00000552015 2118 ntBASIC19.25■□□□□ 0.67
VARS2Q5ST30 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VARS2Q5ST30 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VARS2Q5ST30 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VARS2Q5ST30 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VARS2Q5ST30 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.25■□□□□ 0.67
VARS2Q5ST30 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
VARS2Q5ST30 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VARS2Q5ST30 GMCL1P1-201ENST00000463439 1581 ntBASIC19.24■□□□□ 0.67
VARS2Q5ST30 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VARS2Q5ST30 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VARS2Q5ST30 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VARS2Q5ST30 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VARS2Q5ST30 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VARS2Q5ST30 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VARS2Q5ST30 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.24■□□□□ 0.67
VARS2Q5ST30 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
VARS2Q5ST30 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
VARS2Q5ST30 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.24■□□□□ 0.67
VARS2Q5ST30 SAPCD2P3-201ENST00000455031 850 ntBASIC19.24■□□□□ 0.67
VARS2Q5ST30 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.24■□□□□ 0.67
VARS2Q5ST30 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms