Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH1Q08174 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
PCDH1Q08174 PVRIG2P-201ENST00000435460 978 ntBASIC17.61■□□□□ 0.41
PCDH1Q08174 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH1Q08174 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDH1Q08174 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDH1Q08174 AC008687.5-201ENST00000593746 558 ntBASIC17.61■□□□□ 0.41
PCDH1Q08174 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDH1Q08174 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH1Q08174 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDH1Q08174 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDH1Q08174 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH1Q08174 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
PCDH1Q08174 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH1Q08174 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCDH1Q08174 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDH1Q08174 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDH1Q08174 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDH1Q08174 AC008764.6-201ENST00000595909 2069 ntBASIC17.6■□□□□ 0.41
PCDH1Q08174 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDH1Q08174 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDH1Q08174 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PCDH1Q08174 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PCDH1Q08174 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
PCDH1Q08174 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDH1Q08174 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH1Q08174 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH1Q08174 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDH1Q08174 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDH1Q08174 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDH1Q08174 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH1Q08174 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDH1Q08174 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
PCDH1Q08174 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDH1Q08174 AL031432.5-201ENST00000641059 760 ntBASIC17.6■□□□□ 0.41
PCDH1Q08174 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.6■□□□□ 0.41
PCDH1Q08174 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
PCDH1Q08174 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDH1Q08174 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH1Q08174 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH1Q08174 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH1Q08174 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH1Q08174 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
PCDH1Q08174 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH1Q08174 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH1Q08174 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH1Q08174 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH1Q08174 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH1Q08174 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH1Q08174 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH1Q08174 AC073508.3-201ENST00000619697 1419 ntBASIC17.59■□□□□ 0.41
PCDH1Q08174 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PCDH1Q08174 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH1Q08174 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH1Q08174 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PCDH1Q08174 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDH1Q08174 DUTP2-201ENST00000519164 463 ntBASIC17.59■□□□□ 0.41
PCDH1Q08174 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH1Q08174 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDH1Q08174 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
PCDH1Q08174 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH1Q08174 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH1Q08174 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH1Q08174 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
PCDH1Q08174 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH1Q08174 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH1Q08174 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH1Q08174 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH1Q08174 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH1Q08174 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH1Q08174 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PCDH1Q08174 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
PCDH1Q08174 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH1Q08174 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH1Q08174 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH1Q08174 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH1Q08174 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
PCDH1Q08174 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
PCDH1Q08174 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms