Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 GREB1-203ENST00000381483 2347 ntTSL 1 (best) BASIC9.53□□□□□ -0.885e-6■□□□□ 8.1
LSM11P83369 CLUHP3-206ENST00000562354 4117 ntTSL 1 (best) BASIC8.21□□□□□ -1.15e-6■□□□□ 8.1
LSM11P83369 MORF4L2-201ENST00000360458 1824 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.15e-6■□□□□ 8.1
LSM11P83369 IVNS1ABP-209ENST00000494880 2527 ntTSL 1 (best)8.12□□□□□ -1.115e-6■□□□□ 8.1
LSM11P83369 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC8.05□□□□□ -1.125e-6■□□□□ 8.1
LSM11P83369 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.175e-6■□□□□ 8.1
LSM11P83369 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC7.69□□□□□ -1.185e-6■□□□□ 8.1
LSM11P83369 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC7.35□□□□□ -1.235e-6■□□□□ 8.1
LSM11P83369 CCT8P1-201ENST00000413611 1657 ntBASIC7.3□□□□□ -1.245e-6■□□□□ 8.1
LSM11P83369 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.265e-6■□□□□ 8.1
LSM11P83369 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.265e-6■□□□□ 8.1
LSM11P83369 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.265e-6■□□□□ 8.1
LSM11P83369 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.285e-6■□□□□ 8.1
LSM11P83369 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.435e-6■□□□□ 8.1
LSM11P83369 PRRC2C-211ENST00000495585 5566 ntTSL 1 (best)4.69□□□□□ -1.665e-6■□□□□ 8.1
LSM11P83369 MIR3064-201ENST00000581130 66 ntBASIC3.74□□□□□ -1.818e-9■□□□□ 8.1
LSM11P83369 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.981e-17■□□□□ 8.1
LSM11P83369 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.861e-17■□□□□ 8.1
LSM11P83369 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.31e-17■□□□□ 8.1
LSM11P83369 HNRNPD-211ENST00000514671 1089 ntTSL 511.18□□□□□ -0.621e-17■□□□□ 8.1
LSM11P83369 HNRNPD-210ENST00000514325 4597 ntTSL 1 (best)4.33□□□□□ -1.721e-17■□□□□ 8.1
LSM11P83369 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.16e-19■□□□□ 8.1
LSM11P83369 DDB2-212ENST00000617022 2181 ntTSL 214.55□□□□□ -0.084e-10■□□□□ 8.1
LSM11P83369 DDB2-203ENST00000378601 1591 ntTSL 214.09□□□□□ -0.154e-10■□□□□ 8.1
LSM11P83369 DDB2-201ENST00000256996 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.594e-10■□□□□ 8.1
LSM11P83369 DDB2-213ENST00000617847 1649 ntTSL 510.95□□□□□ -0.664e-10■□□□□ 8.1
LSM11P83369 DDB2-209ENST00000614884 660 ntTSL 210.53□□□□□ -0.724e-10■□□□□ 8.1
LSM11P83369 APOH-204ENST00000585162 407 ntTSL 28.99□□□□□ -0.976e-19■□□□□ 8.1
LSM11P83369 DDB2-206ENST00000612309 3101 ntTSL 27.65□□□□□ -1.184e-10■□□□□ 8.1
LSM11P83369 ZNF692-217ENST00000495731 461 ntTSL 324.02■■□□□ 1.441e-7■□□□□ 8
LSM11P83369 RPS7-205ENST00000462576 907 ntTSL 1 (best)22.99■■□□□ 1.272e-7■□□□□ 8
LSM11P83369 ZNF692-225ENST00000533614 553 ntTSL 420.38■□□□□ 0.851e-7■□□□□ 8
LSM11P83369 ZNF692-226ENST00000533647 548 ntTSL 319.31■□□□□ 0.681e-7■□□□□ 8
LSM11P83369 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.652e-7■□□□□ 8
LSM11P83369 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.632e-7■□□□□ 8
LSM11P83369 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.83■□□□□ 0.62e-7■□□□□ 8
LSM11P83369 ZNF692-220ENST00000496411 1064 ntTSL 318.43■□□□□ 0.541e-7■□□□□ 8
LSM11P83369 MUS81-213ENST00000530928 1793 ntTSL 218.07■□□□□ 0.482e-7■□□□□ 8
LSM11P83369 ZNF692-219ENST00000496231 656 ntTSL 318.01■□□□□ 0.471e-7■□□□□ 8
LSM11P83369 ZNF692-212ENST00000478107 1051 ntTSL 517.82■□□□□ 0.441e-7■□□□□ 8
LSM11P83369 ZNF692-224ENST00000530986 595 ntTSL 417.75■□□□□ 0.431e-7■□□□□ 8
LSM11P83369 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.2■□□□□ 0.342e-7■□□□□ 8
LSM11P83369 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.76■□□□□ 0.272e-7■□□□□ 8
LSM11P83369 ZNF692-218ENST00000496053 694 ntTSL 316.14■□□□□ 0.171e-7■□□□□ 8
LSM11P83369 ZNF692-215ENST00000483791 681 ntTSL 315.86■□□□□ 0.131e-7■□□□□ 8
LSM11P83369 ZNF692-221ENST00000497847 1031 ntTSL 215.86■□□□□ 0.131e-7■□□□□ 8
LSM11P83369 MUS81-202ENST00000524647 1817 ntTSL 515.8■□□□□ 0.122e-7■□□□□ 8
LSM11P83369 ZNF692-222ENST00000528141 576 ntTSL 415.64■□□□□ 0.091e-7■□□□□ 8
LSM11P83369 ZNF692-214ENST00000483223 901 ntTSL 315.48■□□□□ 0.071e-7■□□□□ 8
LSM11P83369 ZNF692-207ENST00000468455 644 ntTSL 515.46■□□□□ 0.071e-7■□□□□ 8
LSM11P83369 ZNF692-223ENST00000530699 896 ntTSL 1 (best)15.24■□□□□ 0.031e-7■□□□□ 8
LSM11P83369 MUS81-208ENST00000529742 733 ntTSL 214.61□□□□□ -0.072e-7■□□□□ 8
LSM11P83369 SUMF2-209ENST00000436782 1683 ntTSL 1 (best)14.21□□□□□ -0.132e-7■□□□□ 8
LSM11P83369 RPS7-208ENST00000481006 5429 ntTSL 1 (best)13.96□□□□□ -0.172e-7■□□□□ 8
LSM11P83369 SUMF2-207ENST00000423763 1792 ntTSL 213.48□□□□□ -0.252e-7■□□□□ 8
LSM11P83369 MUS81-212ENST00000530282 755 ntTSL 213.04□□□□□ -0.322e-7■□□□□ 8
LSM11P83369 CDK5RAP2-206ENST00000433194 815 ntTSL 312.41□□□□□ -0.422e-7■□□□□ 8
LSM11P83369 ZNF692-230ENST00000534660 552 ntTSL 312.35□□□□□ -0.431e-7■□□□□ 8
LSM11P83369 SUMF2-211ENST00000438133 1771 ntTSL 1 (best)12.13□□□□□ -0.472e-7■□□□□ 8
LSM11P83369 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.482e-7■□□□□ 8
LSM11P83369 MUS81-216ENST00000533519 694 ntTSL 211.89□□□□□ -0.512e-7■□□□□ 8
LSM11P83369 MUS81-214ENST00000531905 3420 ntTSL 510.69□□□□□ -0.72e-7■□□□□ 8
LSM11P83369 RPS7-206ENST00000472966 556 ntTSL 1 (best)10.51□□□□□ -0.732e-7■□□□□ 8
LSM11P83369 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.742e-7■□□□□ 8
LSM11P83369 CDK5RAP2-217ENST00000484546 1269 ntTSL 1 (best)10.29□□□□□ -0.762e-7■□□□□ 8
LSM11P83369 RPS7-203ENST00000406376 704 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.862e-7■□□□□ 8
LSM11P83369 CDK5RAP2-219ENST00000495406 635 ntTSL 29.37□□□□□ -0.912e-7■□□□□ 8
LSM11P83369 PGK1-201ENST00000373316 4887 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.943e-14■□□□□ 8
LSM11P83369 CDK5RAP2-213ENST00000480467 931 ntTSL 39.12□□□□□ -0.952e-7■□□□□ 8
LSM11P83369 HERC2P2-205ENST00000619021 5746 ntTSL 1 (best) BASIC8.95□□□□□ -0.982e-7■□□□□ 8
LSM11P83369 RPS7-204ENST00000407445 833 ntTSL 2 BASIC8.44□□□□□ -1.062e-7■□□□□ 8
LSM11P83369 PGK1-205ENST00000491291 702 ntTSL 58.08□□□□□ -1.123e-14■□□□□ 8
LSM11P83369 CDK5RAP2-210ENST00000474262 549 ntTSL 27.79□□□□□ -1.162e-7■□□□□ 8
LSM11P83369 MUS81-203ENST00000525006 434 ntTSL 36.13□□□□□ -1.432e-7■□□□□ 8
LSM11P83369 FANCA-222ENST00000567205 413 ntTSL 1 (best)14.28□□□□□ -0.121e-9■□□□□ 8
LSM11P83369 INTS11-211ENST00000461514 913 ntTSL 218.15■□□□□ 0.54e-7■□□□□ 8
LSM11P83369 INTS11-225ENST00000525164 816 ntTSL 316.11■□□□□ 0.174e-7■□□□□ 8
LSM11P83369 INTS11-228ENST00000525769 695 ntTSL 316.11■□□□□ 0.174e-7■□□□□ 8
LSM11P83369 INTS11-217ENST00000485710 883 ntTSL 516■□□□□ 0.154e-7■□□□□ 8
LSM11P83369 INTS11-242ENST00000531377 816 ntTSL 515.18■□□□□ 0.024e-7■□□□□ 8
LSM11P83369 INTS11-234ENST00000527383 668 ntTSL 313.36□□□□□ -0.274e-7■□□□□ 8
LSM11P83369 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.112e-7■□□□□ 8
LSM11P83369 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.94■■□□□ 1.12e-7■□□□□ 8
LSM11P83369 PREB-206ENST00000444452 2030 ntTSL 1 (best)20.94■□□□□ 0.942e-7■□□□□ 8
LSM11P83369 PREB-208ENST00000468045 3057 ntTSL 217.01■□□□□ 0.312e-7■□□□□ 8
LSM11P83369 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.06■□□□□ 0.168e-14■□□□□ 8
LSM11P83369 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.142e-7■□□□□ 8
LSM11P83369 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.078e-14■□□□□ 8
LSM11P83369 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.362e-7■□□□□ 8
LSM11P83369 TRIM27-205ENST00000481474 7006 ntTSL 1 (best)10.6□□□□□ -0.718e-14■□□□□ 8
LSM11P83369 PREB-207ENST00000456259 1105 ntTSL 210.02□□□□□ -0.812e-7■□□□□ 8
LSM11P83369 VPS54-204ENST00000416400 1277 ntTSL 1 (best)9.72□□□□□ -0.852e-7■□□□□ 8
LSM11P83369 TRIM27-203ENST00000414543 1813 ntTSL 39.44□□□□□ -0.98e-14■□□□□ 8
LSM11P83369 TRIM27-204ENST00000467742 541 ntTSL 28.49□□□□□ -1.058e-14■□□□□ 8
LSM11P83369 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.87□□□□□ -1.792e-7■□□□□ 8
Retrieved 95 of 11,495 protein–RNA pairs in 35.9 ms