Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
CCL20P78556 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
CCL20P78556 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL20P78556 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL20P78556 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL20P78556 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL20P78556 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL20P78556 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCL20P78556 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL20P78556 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL20P78556 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL20P78556 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL20P78556 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCL20P78556 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL20P78556 AL513477.1-201ENST00000602865 2407 ntBASIC14.39□□□□□ -0.11
CCL20P78556 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL20P78556 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCL20P78556 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.38□□□□□ -0.11
CCL20P78556 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.38□□□□□ -0.11
CCL20P78556 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.38□□□□□ -0.11
CCL20P78556 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CCL20P78556 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL20P78556 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL20P78556 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL20P78556 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CCL20P78556 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.38□□□□□ -0.11
CCL20P78556 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCL20P78556 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL20P78556 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL20P78556 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CCL20P78556 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL20P78556 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.38□□□□□ -0.11
CCL20P78556 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CCL20P78556 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL20P78556 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL20P78556 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL20P78556 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CCL20P78556 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL20P78556 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
CCL20P78556 KRT18P55-202ENST00000578578 1546 ntBASIC14.37□□□□□ -0.11
CCL20P78556 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL20P78556 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL20P78556 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL20P78556 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL20P78556 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL20P78556 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL20P78556 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.37□□□□□ -0.11
CCL20P78556 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL20P78556 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL20P78556 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.37□□□□□ -0.11
CCL20P78556 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL20P78556 AC073210.2-201ENST00000430369 194 ntBASIC14.37□□□□□ -0.11
CCL20P78556 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC14.37□□□□□ -0.11
CCL20P78556 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL20P78556 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CCL20P78556 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.37□□□□□ -0.11
CCL20P78556 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL20P78556 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL20P78556 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL20P78556 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL20P78556 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL20P78556 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCL20P78556 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCL20P78556 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCL20P78556 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.37□□□□□ -0.11
CCL20P78556 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL20P78556 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CCL20P78556 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCL20P78556 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL20P78556 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
CCL20P78556 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
CCL20P78556 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.36□□□□□ -0.11
CCL20P78556 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL20P78556 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms