Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.72■□□□□ 0.27
CDC42P60953 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42P60953 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.71■□□□□ 0.27
CDC42P60953 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.71■□□□□ 0.27
CDC42P60953 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDC42P60953 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42P60953 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.71■□□□□ 0.27
CDC42P60953 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42P60953 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CDC42P60953 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.71■□□□□ 0.27
CDC42P60953 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.71■□□□□ 0.27
CDC42P60953 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.71■□□□□ 0.27
CDC42P60953 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42P60953 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.71■□□□□ 0.27
CDC42P60953 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42P60953 AC131212.4-201ENST00000623606 975 ntBASIC16.71■□□□□ 0.27
CDC42P60953 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.71■□□□□ 0.27
CDC42P60953 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42P60953 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42P60953 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42P60953 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42P60953 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42P60953 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42P60953 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.71■□□□□ 0.26
CDC42P60953 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CDC42P60953 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC42P60953 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC42P60953 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC42P60953 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.7■□□□□ 0.26
CDC42P60953 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDC42P60953 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC42P60953 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.7■□□□□ 0.26
CDC42P60953 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CDC42P60953 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC42P60953 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.7■□□□□ 0.26
CDC42P60953 PHGDH-209ENST00000641074 1780 ntBASIC16.7■□□□□ 0.26
CDC42P60953 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.7■□□□□ 0.26
CDC42P60953 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.7■□□□□ 0.26
CDC42P60953 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CDC42P60953 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.7■□□□□ 0.26
CDC42P60953 AC006116.8-202ENST00000587620 1550 ntBASIC16.7■□□□□ 0.26
CDC42P60953 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.7■□□□□ 0.26
CDC42P60953 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CDC42P60953 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC42P60953 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CDC42P60953 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.7■□□□□ 0.26
CDC42P60953 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDC42P60953 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.7■□□□□ 0.26
CDC42P60953 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CDC42P60953 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.7■□□□□ 0.26
CDC42P60953 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.7■□□□□ 0.26
CDC42P60953 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC42P60953 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.7■□□□□ 0.26
CDC42P60953 FER1L4-210ENST00000615531 5998 ntBASIC16.7■□□□□ 0.26
CDC42P60953 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.7■□□□□ 0.26
CDC42P60953 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDC42P60953 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC42P60953 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDC42P60953 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.7■□□□□ 0.26
CDC42P60953 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC42P60953 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.7■□□□□ 0.26
CDC42P60953 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC42P60953 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
CDC42P60953 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
CDC42P60953 AC080080.1-201ENST00000625121 2420 ntBASIC16.69■□□□□ 0.26
CDC42P60953 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 AL109659.2-201ENST00000606809 1674 ntBASIC16.69■□□□□ 0.26
CDC42P60953 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.69■□□□□ 0.26
CDC42P60953 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CDC42P60953 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.69■□□□□ 0.26
CDC42P60953 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.69■□□□□ 0.26
CDC42P60953 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.69■□□□□ 0.26
CDC42P60953 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.69■□□□□ 0.26
CDC42P60953 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.69■□□□□ 0.26
CDC42P60953 AL445675.2-201ENST00000620291 557 ntBASIC16.69■□□□□ 0.26
CDC42P60953 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.69■□□□□ 0.26
CDC42P60953 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CDC42P60953 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CDC42P60953 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42P60953 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms