Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NR1H2P55055 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NR1H2P55055 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.33■□□□□ 0.36
NR1H2P55055 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H2P55055 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.32■□□□□ 0.36
NR1H2P55055 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H2P55055 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
NR1H2P55055 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NR1H2P55055 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H2P55055 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
NR1H2P55055 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
NR1H2P55055 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H2P55055 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NR1H2P55055 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H2P55055 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H2P55055 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.32■□□□□ 0.36
NR1H2P55055 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NR1H2P55055 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NR1H2P55055 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.32■□□□□ 0.36
NR1H2P55055 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.32■□□□□ 0.36
NR1H2P55055 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.32■□□□□ 0.36
NR1H2P55055 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.32■□□□□ 0.36
NR1H2P55055 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H2P55055 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.32■□□□□ 0.36
NR1H2P55055 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.32■□□□□ 0.36
NR1H2P55055 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.32■□□□□ 0.36
NR1H2P55055 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H2P55055 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H2P55055 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
NR1H2P55055 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NR1H2P55055 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NR1H2P55055 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.32■□□□□ 0.36
NR1H2P55055 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H2P55055 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H2P55055 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NR1H2P55055 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H2P55055 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H2P55055 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H2P55055 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H2P55055 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NR1H2P55055 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.31■□□□□ 0.36
NR1H2P55055 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.31■□□□□ 0.36
NR1H2P55055 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.31■□□□□ 0.36
NR1H2P55055 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.31■□□□□ 0.36
NR1H2P55055 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NR1H2P55055 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.31■□□□□ 0.36
NR1H2P55055 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 AC211429.1-201ENST00000415277 523 ntBASIC17.31■□□□□ 0.36
NR1H2P55055 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.31■□□□□ 0.36
NR1H2P55055 KRT16P5-201ENST00000455284 522 ntBASIC17.31■□□□□ 0.36
NR1H2P55055 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.31■□□□□ 0.36
NR1H2P55055 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.31■□□□□ 0.36
NR1H2P55055 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.31■□□□□ 0.36
NR1H2P55055 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.31■□□□□ 0.36
NR1H2P55055 AC004264.1-201ENST00000608354 794 ntBASIC17.31■□□□□ 0.36
NR1H2P55055 REXO1L12P-201ENST00000622156 912 ntBASIC17.31■□□□□ 0.36
NR1H2P55055 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NR1H2P55055 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NR1H2P55055 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.31■□□□□ 0.36
NR1H2P55055 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H2P55055 NBPF21P-201ENST00000425093 1451 ntBASIC17.31■□□□□ 0.36
NR1H2P55055 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H2P55055 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.3■□□□□ 0.36
NR1H2P55055 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H2P55055 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H2P55055 AL162727.3-201ENST00000635661 2787 ntBASIC17.3■□□□□ 0.36
NR1H2P55055 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NR1H2P55055 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H2P55055 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.3■□□□□ 0.36
NR1H2P55055 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H2P55055 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NR1H2P55055 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H2P55055 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H2P55055 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H2P55055 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NR1H2P55055 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms