Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AL049840.3-201ENST00000602669 611 ntBASIC20.18■□□□□ 0.82
CPT1AP50416 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPT1AP50416 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.18■□□□□ 0.82
CPT1AP50416 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.18■□□□□ 0.82
CPT1AP50416 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.18■□□□□ 0.82
CPT1AP50416 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.18■□□□□ 0.82
CPT1AP50416 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.18■□□□□ 0.82
CPT1AP50416 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPT1AP50416 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPT1AP50416 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.18■□□□□ 0.82
CPT1AP50416 AP005117.1-201ENST00000584346 1413 ntBASIC20.18■□□□□ 0.82
CPT1AP50416 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPT1AP50416 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPT1AP50416 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPT1AP50416 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPT1AP50416 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.17■□□□□ 0.82
CPT1AP50416 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CPT1AP50416 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPT1AP50416 RPL13AP23-201ENST00000480739 586 ntBASIC20.17■□□□□ 0.82
CPT1AP50416 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPT1AP50416 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.17■□□□□ 0.82
CPT1AP50416 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.17■□□□□ 0.82
CPT1AP50416 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.17■□□□□ 0.82
CPT1AP50416 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPT1AP50416 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPT1AP50416 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPT1AP50416 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPT1AP50416 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CPT1AP50416 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPT1AP50416 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CPT1AP50416 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CPT1AP50416 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPT1AP50416 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CPT1AP50416 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CPT1AP50416 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CPT1AP50416 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPT1AP50416 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPT1AP50416 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.16■□□□□ 0.82
CPT1AP50416 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.16■□□□□ 0.82
CPT1AP50416 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CPT1AP50416 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPT1AP50416 HNRNPDP1-201ENST00000439535 754 ntBASIC20.16■□□□□ 0.82
CPT1AP50416 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.16■□□□□ 0.82
CPT1AP50416 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.16■□□□□ 0.82
CPT1AP50416 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.16■□□□□ 0.82
CPT1AP50416 ZNF259P1-201ENST00000407656 1365 ntBASIC20.16■□□□□ 0.82
CPT1AP50416 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPT1AP50416 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPT1AP50416 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.16■□□□□ 0.82
CPT1AP50416 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.16■□□□□ 0.82
CPT1AP50416 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CPT1AP50416 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.16■□□□□ 0.82
CPT1AP50416 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPT1AP50416 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.15■□□□□ 0.82
CPT1AP50416 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPT1AP50416 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPT1AP50416 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPT1AP50416 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPT1AP50416 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPT1AP50416 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CPT1AP50416 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.15■□□□□ 0.82
CPT1AP50416 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPT1AP50416 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.15■□□□□ 0.82
CPT1AP50416 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.15■□□□□ 0.82
CPT1AP50416 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.15■□□□□ 0.82
CPT1AP50416 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.15■□□□□ 0.82
CPT1AP50416 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPT1AP50416 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.15■□□□□ 0.82
CPT1AP50416 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
CPT1AP50416 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CPT1AP50416 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPT1AP50416 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPT1AP50416 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPT1AP50416 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPT1AP50416 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPT1AP50416 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPT1AP50416 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CPT1AP50416 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CPT1AP50416 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.14■□□□□ 0.81
CPT1AP50416 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.14■□□□□ 0.81
CPT1AP50416 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CPT1AP50416 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CPT1AP50416 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPT1AP50416 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CPT1AP50416 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPT1AP50416 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CPT1AP50416 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.14■□□□□ 0.81
CPT1AP50416 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPT1AP50416 AC112698.1-201ENST00000510299 916 ntBASIC20.14■□□□□ 0.81
CPT1AP50416 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.14■□□□□ 0.81
CPT1AP50416 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CPT1AP50416 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPT1AP50416 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.14■□□□□ 0.81
CPT1AP50416 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.14■□□□□ 0.81
CPT1AP50416 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.14■□□□□ 0.81
CPT1AP50416 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.14■□□□□ 0.81
CPT1AP50416 AC139530.3-201ENST00000620344 690 ntBASIC20.14■□□□□ 0.81
CPT1AP50416 AC116407.3-201ENST00000623905 1129 ntBASIC20.14■□□□□ 0.81
CPT1AP50416 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CPT1AP50416 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms