Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A1P43005 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A1P43005 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC1A1P43005 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A1P43005 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SLC1A1P43005 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A1P43005 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A1P43005 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A1P43005 LINC00896-202ENST00000609602 2128 ntBASIC19.12■□□□□ 0.65
SLC1A1P43005 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A1P43005 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A1P43005 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SLC1A1P43005 AL024508.2-201ENST00000607749 1894 ntBASIC19.12■□□□□ 0.65
SLC1A1P43005 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A1P43005 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A1P43005 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A1P43005 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A1P43005 AC128688.1-201ENST00000487626 519 ntBASIC19.12■□□□□ 0.65
SLC1A1P43005 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC1A1P43005 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC1A1P43005 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A1P43005 AC010240.3-201ENST00000607688 395 ntBASIC19.12■□□□□ 0.65
SLC1A1P43005 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SLC1A1P43005 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A1P43005 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A1P43005 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SLC1A1P43005 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC1A1P43005 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A1P43005 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SLC1A1P43005 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A1P43005 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC1A1P43005 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SLC1A1P43005 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A1P43005 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SLC1A1P43005 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A1P43005 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A1P43005 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A1P43005 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC1A1P43005 KRT18P55-202ENST00000578578 1546 ntBASIC19.11■□□□□ 0.65
SLC1A1P43005 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.11■□□□□ 0.65
SLC1A1P43005 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC1A1P43005 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A1P43005 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A1P43005 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SLC1A1P43005 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
SLC1A1P43005 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A1P43005 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A1P43005 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A1P43005 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A1P43005 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A1P43005 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC1A1P43005 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A1P43005 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A1P43005 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A1P43005 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC1A1P43005 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SLC1A1P43005 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A1P43005 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A1P43005 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC1A1P43005 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A1P43005 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SLC1A1P43005 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A1P43005 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC1A1P43005 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SLC1A1P43005 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A1P43005 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
SLC1A1P43005 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.1■□□□□ 0.65
SLC1A1P43005 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC1A1P43005 AL512604.3-201ENST00000569583 964 ntBASIC19.1■□□□□ 0.65
SLC1A1P43005 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC1A1P43005 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC1A1P43005 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A1P43005 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A1P43005 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SLC1A1P43005 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SLC1A1P43005 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SLC1A1P43005 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A1P43005 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SLC1A1P43005 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC1A1P43005 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A1P43005 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SLC1A1P43005 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC1A1P43005 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC1A1P43005 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A1P43005 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A1P43005 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A1P43005 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SLC1A1P43005 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A1P43005 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SLC1A1P43005 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC1A1P43005 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A1P43005 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A1P43005 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A1P43005 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.09■□□□□ 0.65
SLC1A1P43005 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.09■□□□□ 0.65
SLC1A1P43005 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A1P43005 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A1P43005 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SLC1A1P43005 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC1A1P43005 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms