Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNNA1P35221 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNNA1P35221 ABHD17AP1-201ENST00000358206 933 ntBASIC19.29■□□□□ 0.68
CTNNA1P35221 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.29■□□□□ 0.68
CTNNA1P35221 RPS2P55-201ENST00000397318 883 ntBASIC19.29■□□□□ 0.68
CTNNA1P35221 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNNA1P35221 AC098590.1-201ENST00000468126 897 ntBASIC19.29■□□□□ 0.68
CTNNA1P35221 AC107956.1-201ENST00000494359 873 ntBASIC19.29■□□□□ 0.68
CTNNA1P35221 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.29■□□□□ 0.68
CTNNA1P35221 REXO1L10P-201ENST00000615707 1290 ntBASIC19.29■□□□□ 0.68
CTNNA1P35221 REXO1L12P-201ENST00000622156 912 ntBASIC19.29■□□□□ 0.68
CTNNA1P35221 AC113410.3-201ENST00000623366 203 ntBASIC19.29■□□□□ 0.68
CTNNA1P35221 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTNNA1P35221 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNNA1P35221 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTNNA1P35221 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTNNA1P35221 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNNA1P35221 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTNNA1P35221 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.29■□□□□ 0.68
CTNNA1P35221 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTNNA1P35221 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.29■□□□□ 0.68
CTNNA1P35221 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNNA1P35221 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.29■□□□□ 0.68
CTNNA1P35221 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNNA1P35221 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
CTNNA1P35221 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
CTNNA1P35221 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNNA1P35221 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTNNA1P35221 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.28■□□□□ 0.68
CTNNA1P35221 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNNA1P35221 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CTNNA1P35221 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTNNA1P35221 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTNNA1P35221 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNNA1P35221 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CTNNA1P35221 AC012618.2-201ENST00000428058 849 ntBASIC19.28■□□□□ 0.68
CTNNA1P35221 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CTNNA1P35221 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNNA1P35221 AC142381.4-202ENST00000563973 229 ntBASIC19.28■□□□□ 0.68
CTNNA1P35221 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.28■□□□□ 0.68
CTNNA1P35221 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.28■□□□□ 0.68
CTNNA1P35221 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNNA1P35221 PHGDH-209ENST00000641074 1780 ntBASIC19.28■□□□□ 0.68
CTNNA1P35221 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNNA1P35221 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.28■□□□□ 0.68
CTNNA1P35221 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNNA1P35221 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNNA1P35221 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTNNA1P35221 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CTNNA1P35221 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTNNA1P35221 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CTNNA1P35221 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNNA1P35221 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.27■□□□□ 0.68
CTNNA1P35221 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTNNA1P35221 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.27■□□□□ 0.68
CTNNA1P35221 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.27■□□□□ 0.68
CTNNA1P35221 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTNNA1P35221 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTNNA1P35221 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.27■□□□□ 0.68
CTNNA1P35221 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CTNNA1P35221 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CTNNA1P35221 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTNNA1P35221 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTNNA1P35221 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.27■□□□□ 0.68
CTNNA1P35221 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.27■□□□□ 0.68
CTNNA1P35221 AC233702.5-201ENST00000584107 538 ntBASIC19.27■□□□□ 0.68
CTNNA1P35221 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.27■□□□□ 0.68
CTNNA1P35221 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.27■□□□□ 0.68
CTNNA1P35221 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTNNA1P35221 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTNNA1P35221 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.27■□□□□ 0.68
CTNNA1P35221 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.27■□□□□ 0.68
CTNNA1P35221 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTNNA1P35221 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTNNA1P35221 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTNNA1P35221 AC036111.1-201ENST00000533973 1582 ntBASIC19.27■□□□□ 0.67
CTNNA1P35221 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTNNA1P35221 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTNNA1P35221 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTNNA1P35221 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CTNNA1P35221 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTNNA1P35221 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTNNA1P35221 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.26■□□□□ 0.67
CTNNA1P35221 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTNNA1P35221 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.26■□□□□ 0.67
CTNNA1P35221 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTNNA1P35221 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTNNA1P35221 SDHAP2-201ENST00000455183 2001 ntBASIC19.26■□□□□ 0.67
CTNNA1P35221 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CTNNA1P35221 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CTNNA1P35221 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.26■□□□□ 0.67
CTNNA1P35221 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTNNA1P35221 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTNNA1P35221 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTNNA1P35221 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.26■□□□□ 0.67
CTNNA1P35221 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.26■□□□□ 0.67
CTNNA1P35221 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.26■□□□□ 0.67
CTNNA1P35221 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.26■□□□□ 0.67
CTNNA1P35221 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.26■□□□□ 0.67
CTNNA1P35221 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms