Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.25■□□□□ 0.35
MT-ND1P03886 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND1P03886 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND1P03886 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
MT-ND1P03886 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND1P03886 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND1P03886 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.24■□□□□ 0.35
MT-ND1P03886 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND1P03886 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND1P03886 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.24■□□□□ 0.35
MT-ND1P03886 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND1P03886 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND1P03886 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.24■□□□□ 0.35
MT-ND1P03886 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND1P03886 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
MT-ND1P03886 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.24■□□□□ 0.35
MT-ND1P03886 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.24■□□□□ 0.35
MT-ND1P03886 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.24■□□□□ 0.35
MT-ND1P03886 AC110285.5-201ENST00000611501 352 ntBASIC17.24■□□□□ 0.35
MT-ND1P03886 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.24■□□□□ 0.35
MT-ND1P03886 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND1P03886 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND1P03886 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND1P03886 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND1P03886 AC022211.2-201ENST00000585075 2527 ntBASIC17.24■□□□□ 0.35
MT-ND1P03886 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.24■□□□□ 0.35
MT-ND1P03886 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.24■□□□□ 0.35
MT-ND1P03886 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND1P03886 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
MT-ND1P03886 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND1P03886 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
MT-ND1P03886 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND1P03886 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND1P03886 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
MT-ND1P03886 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND1P03886 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-ND1P03886 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
MT-ND1P03886 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
MT-ND1P03886 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.23■□□□□ 0.35
MT-ND1P03886 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
MT-ND1P03886 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.23■□□□□ 0.35
MT-ND1P03886 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
MT-ND1P03886 RN7SL471P-201ENST00000580476 299 ntBASIC17.23■□□□□ 0.35
MT-ND1P03886 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
MT-ND1P03886 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.23■□□□□ 0.35
MT-ND1P03886 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.23■□□□□ 0.35
MT-ND1P03886 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND1P03886 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
MT-ND1P03886 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.23■□□□□ 0.35
MT-ND1P03886 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.23■□□□□ 0.35
MT-ND1P03886 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.22■□□□□ 0.35
MT-ND1P03886 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND1P03886 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND1P03886 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
MT-ND1P03886 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
MT-ND1P03886 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
MT-ND1P03886 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
MT-ND1P03886 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND1P03886 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
MT-ND1P03886 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
MT-ND1P03886 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND1P03886 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND1P03886 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.22■□□□□ 0.35
MT-ND1P03886 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.22■□□□□ 0.35
MT-ND1P03886 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.22■□□□□ 0.35
MT-ND1P03886 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.22■□□□□ 0.35
MT-ND1P03886 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.22■□□□□ 0.35
MT-ND1P03886 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.22■□□□□ 0.35
MT-ND1P03886 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.22■□□□□ 0.35
MT-ND1P03886 AL445675.2-201ENST00000620291 557 ntBASIC17.22■□□□□ 0.35
MT-ND1P03886 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
MT-ND1P03886 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND1P03886 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND1P03886 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND1P03886 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND1P03886 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND1P03886 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND1P03886 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.21■□□□□ 0.35
MT-ND1P03886 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms