Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 LINC01568-207ENST00000641790 1380 ntBASIC15.88■□□□□ 0.13
XRCC2O43543 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.88■□□□□ 0.13
XRCC2O43543 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.88■□□□□ 0.13
XRCC2O43543 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.88■□□□□ 0.13
XRCC2O43543 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.88■□□□□ 0.13
XRCC2O43543 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
XRCC2O43543 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
XRCC2O43543 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.88■□□□□ 0.13
XRCC2O43543 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.88■□□□□ 0.13
XRCC2O43543 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.88■□□□□ 0.13
XRCC2O43543 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.88■□□□□ 0.13
XRCC2O43543 ECEL1P2-202ENST00000465689 757 ntBASIC15.88■□□□□ 0.13
XRCC2O43543 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 NEK4P2-201ENST00000580004 1012 ntBASIC15.88■□□□□ 0.13
XRCC2O43543 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.88■□□□□ 0.13
XRCC2O43543 FAM87A-204ENST00000613235 858 ntBASIC15.88■□□□□ 0.13
XRCC2O43543 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 ESPNP-201ENST00000270691 2015 ntBASIC15.88■□□□□ 0.13
XRCC2O43543 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.88■□□□□ 0.13
XRCC2O43543 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.88■□□□□ 0.13
XRCC2O43543 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.88■□□□□ 0.13
XRCC2O43543 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.88■□□□□ 0.13
XRCC2O43543 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
XRCC2O43543 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
XRCC2O43543 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
XRCC2O43543 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
XRCC2O43543 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC2O43543 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC2O43543 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC2O43543 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC2O43543 SDHAP2-201ENST00000455183 2001 ntBASIC15.87■□□□□ 0.13
XRCC2O43543 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.87■□□□□ 0.13
XRCC2O43543 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.87■□□□□ 0.13
XRCC2O43543 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
XRCC2O43543 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
XRCC2O43543 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC2O43543 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC2O43543 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC2O43543 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC2O43543 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC2O43543 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC2O43543 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC2O43543 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.87■□□□□ 0.13
XRCC2O43543 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.87■□□□□ 0.13
XRCC2O43543 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC2O43543 AC009947.2-201ENST00000444014 672 ntBASIC15.87■□□□□ 0.13
XRCC2O43543 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.87■□□□□ 0.13
XRCC2O43543 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC2O43543 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.87■□□□□ 0.13
XRCC2O43543 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.87■□□□□ 0.13
XRCC2O43543 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.87■□□□□ 0.13
XRCC2O43543 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC2O43543 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.87■□□□□ 0.13
XRCC2O43543 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
XRCC2O43543 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC2O43543 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC2O43543 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.87■□□□□ 0.13
XRCC2O43543 NOC2LP1-202ENST00000452600 2235 ntBASIC15.87■□□□□ 0.13
XRCC2O43543 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.87■□□□□ 0.13
XRCC2O43543 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC2O43543 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
XRCC2O43543 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.87■□□□□ 0.13
XRCC2O43543 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.86■□□□□ 0.13
XRCC2O43543 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.86■□□□□ 0.13
XRCC2O43543 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC2O43543 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.86■□□□□ 0.13
XRCC2O43543 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC2O43543 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC2O43543 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
XRCC2O43543 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC2O43543 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC2O43543 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC2O43543 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC2O43543 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC2O43543 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
XRCC2O43543 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.86■□□□□ 0.13
XRCC2O43543 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC2O43543 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
XRCC2O43543 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC2O43543 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.86■□□□□ 0.13
XRCC2O43543 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms