Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.05■□□□□ 0.16
CCL21O00585 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL21O00585 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.05■□□□□ 0.16
CCL21O00585 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CCL21O00585 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CCL21O00585 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.05■□□□□ 0.16
CCL21O00585 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CCL21O00585 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL21O00585 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL21O00585 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCL21O00585 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.05■□□□□ 0.16
CCL21O00585 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.05■□□□□ 0.16
CCL21O00585 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.05■□□□□ 0.16
CCL21O00585 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.05■□□□□ 0.16
CCL21O00585 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.05■□□□□ 0.16
CCL21O00585 IGHV3-22-201ENST00000520721 359 ntBASIC16.05■□□□□ 0.16
CCL21O00585 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL21O00585 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.05■□□□□ 0.16
CCL21O00585 AL356488.2-201ENST00000602755 427 ntBASIC16.05■□□□□ 0.16
CCL21O00585 AC140113.2-201ENST00000604370 208 ntBASIC16.05■□□□□ 0.16
CCL21O00585 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.05■□□□□ 0.16
CCL21O00585 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL21O00585 FAM197Y3-203ENST00000618346 717 ntBASIC16.05■□□□□ 0.16
CCL21O00585 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.05■□□□□ 0.16
CCL21O00585 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL21O00585 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.05■□□□□ 0.16
CCL21O00585 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL21O00585 AL356309.3-201ENST00000624132 1934 ntBASIC16.05■□□□□ 0.16
CCL21O00585 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL21O00585 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCL21O00585 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL21O00585 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL21O00585 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCL21O00585 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.05■□□□□ 0.16
CCL21O00585 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.05■□□□□ 0.16
CCL21O00585 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL21O00585 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL21O00585 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCL21O00585 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL21O00585 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CCL21O00585 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL21O00585 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CCL21O00585 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL21O00585 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL21O00585 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL21O00585 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL21O00585 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL21O00585 PGAM5P1-201ENST00000518923 814 ntBASIC16.04■□□□□ 0.16
CCL21O00585 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.04■□□□□ 0.16
CCL21O00585 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL21O00585 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.04■□□□□ 0.16
CCL21O00585 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL21O00585 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.04■□□□□ 0.16
CCL21O00585 LINC00602-201ENST00000629776 2065 ntBASIC16.04■□□□□ 0.16
CCL21O00585 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL21O00585 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL21O00585 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
CCL21O00585 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL21O00585 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL21O00585 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL21O00585 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL21O00585 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL21O00585 AC125634.1-201ENST00000438758 1403 ntBASIC16.03■□□□□ 0.16
CCL21O00585 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL21O00585 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL21O00585 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CCL21O00585 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.03■□□□□ 0.16
CCL21O00585 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCL21O00585 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL21O00585 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCL21O00585 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL21O00585 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.03■□□□□ 0.16
CCL21O00585 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL21O00585 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL21O00585 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL21O00585 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.03■□□□□ 0.16
CCL21O00585 AC098831.1-202ENST00000438821 336 ntBASIC16.03■□□□□ 0.16
CCL21O00585 AL591424.1-201ENST00000442569 1213 ntBASIC16.03■□□□□ 0.16
CCL21O00585 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.03■□□□□ 0.16
CCL21O00585 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.03■□□□□ 0.16
CCL21O00585 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.03■□□□□ 0.16
CCL21O00585 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.03■□□□□ 0.16
CCL21O00585 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.03■□□□□ 0.16
CCL21O00585 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.03■□□□□ 0.16
CCL21O00585 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.03■□□□□ 0.16
CCL21O00585 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CCL21O00585 MYLKP1-201ENST00000509077 1580 ntBASIC16.03■□□□□ 0.16
CCL21O00585 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CCL21O00585 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CCL21O00585 AL024508.2-201ENST00000607749 1894 ntBASIC16.03■□□□□ 0.16
CCL21O00585 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
CCL21O00585 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CCL21O00585 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.03■□□□□ 0.16
CCL21O00585 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL21O00585 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL21O00585 SDHAP2-201ENST00000455183 2001 ntBASIC16.02■□□□□ 0.16
CCL21O00585 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.02■□□□□ 0.16
CCL21O00585 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCL21O00585 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCL21O00585 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms