Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RCCD1A6NED2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.41■□□□□ 0.7
RCCD1A6NED2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RCCD1A6NED2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RCCD1A6NED2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RCCD1A6NED2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.41■□□□□ 0.7
RCCD1A6NED2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.41■□□□□ 0.7
RCCD1A6NED2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RCCD1A6NED2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RCCD1A6NED2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RCCD1A6NED2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RCCD1A6NED2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
RCCD1A6NED2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RCCD1A6NED2 AC097488.1-201ENST00000507834 756 ntBASIC19.41■□□□□ 0.7
RCCD1A6NED2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RCCD1A6NED2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.41■□□□□ 0.7
RCCD1A6NED2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.41■□□□□ 0.7
RCCD1A6NED2 AL355312.1-201ENST00000407115 2176 ntBASIC19.41■□□□□ 0.7
RCCD1A6NED2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RCCD1A6NED2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RCCD1A6NED2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.41■□□□□ 0.7
RCCD1A6NED2 AL024508.2-201ENST00000607749 1894 ntBASIC19.41■□□□□ 0.7
RCCD1A6NED2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RCCD1A6NED2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.41■□□□□ 0.7
RCCD1A6NED2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RCCD1A6NED2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RCCD1A6NED2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.41■□□□□ 0.7
RCCD1A6NED2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.4■□□□□ 0.7
RCCD1A6NED2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RCCD1A6NED2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RCCD1A6NED2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.4■□□□□ 0.7
RCCD1A6NED2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.4■□□□□ 0.7
RCCD1A6NED2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RCCD1A6NED2 CA15P1-201ENST00000481698 905 ntBASIC19.4■□□□□ 0.7
RCCD1A6NED2 NUDT16P1-203ENST00000513809 620 ntBASIC19.4■□□□□ 0.7
RCCD1A6NED2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.4■□□□□ 0.7
RCCD1A6NED2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RCCD1A6NED2 DGCR10-201ENST00000609839 495 ntBASIC19.4■□□□□ 0.7
RCCD1A6NED2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RCCD1A6NED2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
RCCD1A6NED2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RCCD1A6NED2 HOXB1-202ENST00000577092 1414 ntBASIC19.4■□□□□ 0.7
RCCD1A6NED2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RCCD1A6NED2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RCCD1A6NED2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.4■□□□□ 0.7
RCCD1A6NED2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RCCD1A6NED2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RCCD1A6NED2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.4■□□□□ 0.7
RCCD1A6NED2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RCCD1A6NED2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RCCD1A6NED2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RCCD1A6NED2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RCCD1A6NED2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.39■□□□□ 0.7
RCCD1A6NED2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RCCD1A6NED2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RCCD1A6NED2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RCCD1A6NED2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RCCD1A6NED2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RCCD1A6NED2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RCCD1A6NED2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RCCD1A6NED2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RCCD1A6NED2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.39■□□□□ 0.69
RCCD1A6NED2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.39■□□□□ 0.69
RCCD1A6NED2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.39■□□□□ 0.69
RCCD1A6NED2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RCCD1A6NED2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RCCD1A6NED2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RCCD1A6NED2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.39■□□□□ 0.69
RCCD1A6NED2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RCCD1A6NED2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
RCCD1A6NED2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RCCD1A6NED2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.39■□□□□ 0.69
RCCD1A6NED2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RCCD1A6NED2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RCCD1A6NED2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RCCD1A6NED2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.39■□□□□ 0.69
RCCD1A6NED2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RCCD1A6NED2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.39■□□□□ 0.69
RCCD1A6NED2 AC100803.2-201ENST00000562459 1963 ntBASIC19.39■□□□□ 0.69
RCCD1A6NED2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.39■□□□□ 0.69
RCCD1A6NED2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.39■□□□□ 0.69
RCCD1A6NED2 AP001094.4-201ENST00000579008 2176 ntBASIC19.39■□□□□ 0.69
RCCD1A6NED2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RCCD1A6NED2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RCCD1A6NED2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RCCD1A6NED2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RCCD1A6NED2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RCCD1A6NED2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
RCCD1A6NED2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RCCD1A6NED2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RCCD1A6NED2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RCCD1A6NED2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RCCD1A6NED2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
RCCD1A6NED2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RCCD1A6NED2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RCCD1A6NED2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RCCD1A6NED2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RCCD1A6NED2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RCCD1A6NED2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
RCCD1A6NED2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms