Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC26.9■■□□□ 1.9
HFM1A2PYH4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
HFM1A2PYH4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
HFM1A2PYH4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
HFM1A2PYH4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC26.9■■□□□ 1.9
HFM1A2PYH4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC26.9■■□□□ 1.9
HFM1A2PYH4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC26.9■■□□□ 1.9
HFM1A2PYH4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
HFM1A2PYH4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC26.89■■□□□ 1.9
HFM1A2PYH4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
HFM1A2PYH4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
HFM1A2PYH4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
HFM1A2PYH4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
HFM1A2PYH4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
HFM1A2PYH4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
HFM1A2PYH4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
HFM1A2PYH4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
HFM1A2PYH4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC26.89■■□□□ 1.89
HFM1A2PYH4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
HFM1A2PYH4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
HFM1A2PYH4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
HFM1A2PYH4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
HFM1A2PYH4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC26.89■■□□□ 1.89
HFM1A2PYH4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC26.88■■□□□ 1.89
HFM1A2PYH4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC26.88■■□□□ 1.89
HFM1A2PYH4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
HFM1A2PYH4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC26.88■■□□□ 1.89
HFM1A2PYH4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
HFM1A2PYH4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
HFM1A2PYH4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
HFM1A2PYH4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
HFM1A2PYH4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
HFM1A2PYH4 AKR1C7P-201ENST00000305623 895 ntBASIC26.88■■□□□ 1.89
HFM1A2PYH4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
HFM1A2PYH4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC26.88■■□□□ 1.89
HFM1A2PYH4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
HFM1A2PYH4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC26.88■■□□□ 1.89
HFM1A2PYH4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
HFM1A2PYH4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
HFM1A2PYH4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
HFM1A2PYH4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC26.87■■□□□ 1.89
HFM1A2PYH4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC26.87■■□□□ 1.89
HFM1A2PYH4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
HFM1A2PYH4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
HFM1A2PYH4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC26.87■■□□□ 1.89
HFM1A2PYH4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
HFM1A2PYH4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
HFM1A2PYH4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
HFM1A2PYH4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
HFM1A2PYH4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
HFM1A2PYH4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC26.87■■□□□ 1.89
HFM1A2PYH4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC26.87■■□□□ 1.89
HFM1A2PYH4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
HFM1A2PYH4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC26.87■■□□□ 1.89
HFM1A2PYH4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
HFM1A2PYH4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC26.87■■□□□ 1.89
HFM1A2PYH4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
HFM1A2PYH4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
HFM1A2PYH4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
HFM1A2PYH4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC26.87■■□□□ 1.89
HFM1A2PYH4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC26.87■■□□□ 1.89
HFM1A2PYH4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
HFM1A2PYH4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC26.86■■□□□ 1.89
HFM1A2PYH4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
HFM1A2PYH4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC26.86■■□□□ 1.89
HFM1A2PYH4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
HFM1A2PYH4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
HFM1A2PYH4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
HFM1A2PYH4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
HFM1A2PYH4 NUS1P2-201ENST00000417358 873 ntBASIC26.86■■□□□ 1.89
HFM1A2PYH4 AC096582.2-201ENST00000510860 516 ntBASIC26.86■■□□□ 1.89
HFM1A2PYH4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
HFM1A2PYH4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC26.86■■□□□ 1.89
HFM1A2PYH4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
HFM1A2PYH4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
HFM1A2PYH4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
HFM1A2PYH4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
HFM1A2PYH4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
HFM1A2PYH4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC26.85■■□□□ 1.89
HFM1A2PYH4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC26.85■■□□□ 1.89
HFM1A2PYH4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
HFM1A2PYH4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC26.85■■□□□ 1.89
HFM1A2PYH4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
HFM1A2PYH4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
HFM1A2PYH4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
HFM1A2PYH4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC26.85■■□□□ 1.89
HFM1A2PYH4 EMD-201ENST00000369835 966 ntTSL 3 BASIC26.85■■□□□ 1.89
HFM1A2PYH4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
HFM1A2PYH4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
HFM1A2PYH4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
HFM1A2PYH4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
HFM1A2PYH4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
HFM1A2PYH4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
HFM1A2PYH4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
HFM1A2PYH4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
HFM1A2PYH4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
HFM1A2PYH4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
HFM1A2PYH4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
HFM1A2PYH4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
HFM1A2PYH4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms