Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 AC006116.8-202ENST00000587620 1550 ntBASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 DUX4L2-201ENST00000561772 1275 ntBASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 MIR3621-201ENST00000580529 85 ntBASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 DUX4L6-201ENST00000626483 1275 ntBASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 DUX4L1-201ENST00000627662 1275 ntBASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 DUX4L8-201ENST00000629013 1275 ntBASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 DUX4L3-201ENST00000630187 1275 ntBASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 DUX4L7-201ENST00000630678 1275 ntBASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 DUX4L5-201ENST00000630834 1275 ntBASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAPPC1Q9Y5R8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 CCDC92B-201ENST00000575506 885 ntBASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC1Q9Y5R8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms