Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SPG7Q9UQ90 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC23.82■■□□□ 1.4
SPG7Q9UQ90 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC23.82■■□□□ 1.4
SPG7Q9UQ90 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SPG7Q9UQ90 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC23.82■■□□□ 1.4
SPG7Q9UQ90 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SPG7Q9UQ90 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SPG7Q9UQ90 ADK-206ENST00000541550 2222 ntTSL 2 BASIC23.82■■□□□ 1.4
SPG7Q9UQ90 SCARNA2-201ENST00000458748 420 ntBASIC23.82■■□□□ 1.4
SPG7Q9UQ90 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC23.82■■□□□ 1.4
SPG7Q9UQ90 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC23.82■■□□□ 1.4
SPG7Q9UQ90 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC23.82■■□□□ 1.4
SPG7Q9UQ90 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC23.82■■□□□ 1.4
SPG7Q9UQ90 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC23.82■■□□□ 1.4
SPG7Q9UQ90 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC23.82■■□□□ 1.4
SPG7Q9UQ90 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC23.82■■□□□ 1.4
SPG7Q9UQ90 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SPG7Q9UQ90 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SPG7Q9UQ90 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SPG7Q9UQ90 COBL-210ENST00000632460 1941 ntTSL 5 BASIC23.82■■□□□ 1.4
SPG7Q9UQ90 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC23.82■■□□□ 1.4
SPG7Q9UQ90 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 AC139887.3-201ENST00000568585 713 ntBASIC23.81■■□□□ 1.4
SPG7Q9UQ90 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 AL049840.3-201ENST00000602669 611 ntBASIC23.81■■□□□ 1.4
SPG7Q9UQ90 MIR7706-201ENST00000613747 67 ntBASIC23.81■■□□□ 1.4
SPG7Q9UQ90 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPG7Q9UQ90 LINC01126-201ENST00000623515 1646 ntBASIC23.81■■□□□ 1.4
SPG7Q9UQ90 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 KRT18P58-201ENST00000527480 1120 ntBASIC23.8■■□□□ 1.4
SPG7Q9UQ90 AC106730.1-201ENST00000566722 1090 ntBASIC23.8■■□□□ 1.4
SPG7Q9UQ90 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 PRKN-208ENST00000610470 531 ntTSL 2 BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 PRKN-209ENST00000612485 225 ntTSL 5 BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 FAM215A-202ENST00000632077 792 ntBASIC23.8■■□□□ 1.4
SPG7Q9UQ90 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC23.8■■□□□ 1.4
SPG7Q9UQ90 AL499627.1-201ENST00000569373 2188 ntBASIC23.79■■□□□ 1.4
SPG7Q9UQ90 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPG7Q9UQ90 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SPG7Q9UQ90 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPG7Q9UQ90 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC23.79■■□□□ 1.4
SPG7Q9UQ90 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC23.79■■□□□ 1.4
SPG7Q9UQ90 KRT18P65-201ENST00000439811 1286 ntBASIC23.79■■□□□ 1.4
SPG7Q9UQ90 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC23.79■■□□□ 1.4
SPG7Q9UQ90 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC23.79■■□□□ 1.4
SPG7Q9UQ90 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC23.79■■□□□ 1.4
SPG7Q9UQ90 LITAF-211ENST00000572255 516 ntTSL 4 BASIC23.79■■□□□ 1.4
SPG7Q9UQ90 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
SPG7Q9UQ90 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC23.79■■□□□ 1.4
SPG7Q9UQ90 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC23.79■■□□□ 1.4
SPG7Q9UQ90 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPG7Q9UQ90 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SPG7Q9UQ90 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC23.79■■□□□ 1.4
SPG7Q9UQ90 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPG7Q9UQ90 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPG7Q9UQ90 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SPG7Q9UQ90 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
SPG7Q9UQ90 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
SPG7Q9UQ90 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SPG7Q9UQ90 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SPG7Q9UQ90 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SPG7Q9UQ90 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPG7Q9UQ90 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms