Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NIPSNAP3AQ9UFN0 AL353708.3-201ENST00000610272 989 ntBASIC17.5■□□□□ 0.39
NIPSNAP3AQ9UFN0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NIPSNAP3AQ9UFN0 AL109659.2-201ENST00000606809 1674 ntBASIC17.5■□□□□ 0.39
NIPSNAP3AQ9UFN0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NIPSNAP3AQ9UFN0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.5■□□□□ 0.39
NIPSNAP3AQ9UFN0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NIPSNAP3AQ9UFN0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.5■□□□□ 0.39
NIPSNAP3AQ9UFN0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NIPSNAP3AQ9UFN0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NIPSNAP3AQ9UFN0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
NIPSNAP3AQ9UFN0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NIPSNAP3AQ9UFN0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
NIPSNAP3AQ9UFN0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
NIPSNAP3AQ9UFN0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 FLJ13224-201ENST00000313737 1514 ntBASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 KRT18P41-201ENST00000518924 1277 ntBASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 AC026271.3-201ENST00000571884 352 ntBASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 RN7SL471P-201ENST00000580476 299 ntBASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 AL031985.4-201ENST00000642138 673 ntBASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NIPSNAP3AQ9UFN0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 AL353807.1-201ENST00000427475 662 ntBASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 AC008040.2-201ENST00000461049 708 ntBASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 GMCL1P1-201ENST00000463439 1581 ntBASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPSNAP3AQ9UFN0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms