Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 AC004870.1-201ENST00000315132 882 ntBASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 LINC00265-3P-201ENST00000447588 903 ntBASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 AP000867.3-201ENST00000524675 377 ntBASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HDAC6Q9UBN7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.64■□□□□ 0.9
HDAC6Q9UBN7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HDAC6Q9UBN7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HDAC6Q9UBN7 AL133373.2-201ENST00000623187 2828 ntBASIC20.64■□□□□ 0.9
HDAC6Q9UBN7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.64■□□□□ 0.9
HDAC6Q9UBN7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
HDAC6Q9UBN7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HDAC6Q9UBN7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 AC005332.3-201ENST00000589904 676 ntBASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 AC141586.3-201ENST00000562166 1838 ntBASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 AC034236.2-201ENST00000606662 1610 ntBASIC20.64■□□□□ 0.89
HDAC6Q9UBN7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 PVRIG2P-201ENST00000435460 978 ntBASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 AP003733.1-201ENST00000491725 852 ntBASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 IFNL4P1-201ENST00000607083 540 ntBASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 AL732292.2-201ENST00000609649 430 ntBASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 AL390961.4-201ENST00000623958 2535 ntBASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.63■□□□□ 0.89
HDAC6Q9UBN7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 WIZP1-201ENST00000531444 2299 ntBASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 FDX1P1-201ENST00000449115 551 ntBASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 TOB2P1-201ENST00000469761 992 ntBASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 AC135050.7-201ENST00000624508 2218 ntBASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms