Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.85■□□□□ 0.61
VPS45Q9NRW7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.85■□□□□ 0.61
VPS45Q9NRW7 AC004263.2-201ENST00000617183 678 ntBASIC18.85■□□□□ 0.61
VPS45Q9NRW7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS45Q9NRW7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS45Q9NRW7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS45Q9NRW7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS45Q9NRW7 AL499627.1-201ENST00000569373 2188 ntBASIC18.85■□□□□ 0.61
VPS45Q9NRW7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.85■□□□□ 0.61
VPS45Q9NRW7 AC036111.1-201ENST00000533973 1582 ntBASIC18.85■□□□□ 0.61
VPS45Q9NRW7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 AL022342.1-201ENST00000400363 863 ntBASIC18.84■□□□□ 0.61
VPS45Q9NRW7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 AC092597.1-201ENST00000487352 616 ntBASIC18.84■□□□□ 0.61
VPS45Q9NRW7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 IFNL4P1-201ENST00000607083 540 ntBASIC18.84■□□□□ 0.61
VPS45Q9NRW7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS45Q9NRW7 HOXB1-202ENST00000577092 1414 ntBASIC18.83■□□□□ 0.61
VPS45Q9NRW7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.83■□□□□ 0.61
VPS45Q9NRW7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
VPS45Q9NRW7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS45Q9NRW7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS45Q9NRW7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS45Q9NRW7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.83■□□□□ 0.61
VPS45Q9NRW7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS45Q9NRW7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
VPS45Q9NRW7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VPS45Q9NRW7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 AC126763.1-201ENST00000552015 2118 ntBASIC18.82■□□□□ 0.6
VPS45Q9NRW7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 MYLKP1-201ENST00000509077 1580 ntBASIC18.82■□□□□ 0.6
VPS45Q9NRW7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 AP002383.4-201ENST00000442518 975 ntBASIC18.82■□□□□ 0.6
VPS45Q9NRW7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms