Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 SPDYE15P-201ENST00000424157 909 ntBASIC17.22■□□□□ 0.35
KLHL1Q9NR64 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 AC005332.1-201ENST00000577698 1310 ntBASIC17.21■□□□□ 0.35
KLHL1Q9NR64 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 LINC01311-201ENST00000565162 1445 ntBASIC17.21■□□□□ 0.35
KLHL1Q9NR64 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 STARP1-201ENST00000397973 869 ntBASIC17.21■□□□□ 0.35
KLHL1Q9NR64 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.21■□□□□ 0.35
KLHL1Q9NR64 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHL1Q9NR64 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHL1Q9NR64 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms