Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 AL513190.1-201ENST00000621254 727 ntBASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 PMS2P4-201ENST00000412466 1052 ntBASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 TERF1P3-201ENST00000505638 1227 ntBASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3Q9BZ76 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 MKNK2P1-201ENST00000437526 628 ntBASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 MIR6799-201ENST00000620297 69 ntBASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 AC092865.6-201ENST00000642101 219 ntBASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 TP73-AS1-210ENST00000637775 1455 ntBASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.36■□□□□ 0.37
CNTNAP3Q9BZ76 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 RNA5SP421-201ENST00000516864 134 ntBASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms