Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 RBM17P3-201ENST00000417687 1192 ntBASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 PMS2P1-201ENST00000431037 1228 ntBASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
LRRC3BQ96PB8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 AP005117.1-201ENST00000584346 1413 ntBASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3BQ96PB8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 SART3-203ENST00000546611 1184 ntBASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 AC106730.1-201ENST00000566722 1090 ntBASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 AC139887.3-201ENST00000568585 713 ntBASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 AC116407.3-201ENST00000623905 1129 ntBASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC3BQ96PB8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC3BQ96PB8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3BQ96PB8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRC3BQ96PB8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3BQ96PB8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC3BQ96PB8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3BQ96PB8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3BQ96PB8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LRRC3BQ96PB8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.61■□□□□ 0.57
LRRC3BQ96PB8 KRT18P65-201ENST00000439811 1286 ntBASIC18.61■□□□□ 0.57
LRRC3BQ96PB8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.61■□□□□ 0.57
LRRC3BQ96PB8 SCARNA2-201ENST00000458748 420 ntBASIC18.61■□□□□ 0.57
LRRC3BQ96PB8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.61■□□□□ 0.57
LRRC3BQ96PB8 RPL13AP23-201ENST00000480739 586 ntBASIC18.61■□□□□ 0.57
LRRC3BQ96PB8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3BQ96PB8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC3BQ96PB8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3BQ96PB8 AC021087.4-201ENST00000563761 564 ntBASIC18.61■□□□□ 0.57
LRRC3BQ96PB8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms