Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
CHAMP1Q96JM3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.21■□□□□ 0.99
CHAMP1Q96JM3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.21■□□□□ 0.99
CHAMP1Q96JM3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 LINC01126-201ENST00000623515 1646 ntBASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.2■□□□□ 0.98
CHAMP1Q96JM3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 AC026271.3-201ENST00000571884 352 ntBASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 AP000692.2-201ENST00000608391 879 ntBASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHAMP1Q96JM3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 ECEL1P3-201ENST00000427961 737 ntBASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 FAM210CP-201ENST00000445714 574 ntBASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 AC098590.1-201ENST00000468126 897 ntBASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms