Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
RTL9Q8NET4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTL9Q8NET4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC22.45■■□□□ 1.18
RTL9Q8NET4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
RTL9Q8NET4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTL9Q8NET4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
RTL9Q8NET4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTL9Q8NET4 LINC00602-201ENST00000629776 2065 ntBASIC22.44■■□□□ 1.18
RTL9Q8NET4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
RTL9Q8NET4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTL9Q8NET4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RTL9Q8NET4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC22.44■■□□□ 1.18
RTL9Q8NET4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC22.44■■□□□ 1.18
RTL9Q8NET4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC22.44■■□□□ 1.18
RTL9Q8NET4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RTL9Q8NET4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC22.44■■□□□ 1.18
RTL9Q8NET4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RTL9Q8NET4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC22.44■■□□□ 1.18
RTL9Q8NET4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.44■■□□□ 1.18
RTL9Q8NET4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTL9Q8NET4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC22.44■■□□□ 1.18
RTL9Q8NET4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RTL9Q8NET4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTL9Q8NET4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTL9Q8NET4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
RTL9Q8NET4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RTL9Q8NET4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTL9Q8NET4 TP73-AS1-210ENST00000637775 1455 ntBASIC22.44■■□□□ 1.18
RTL9Q8NET4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTL9Q8NET4 AC125634.1-201ENST00000438758 1403 ntBASIC22.43■■□□□ 1.18
RTL9Q8NET4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RTL9Q8NET4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTL9Q8NET4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTL9Q8NET4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
RTL9Q8NET4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC22.43■■□□□ 1.18
RTL9Q8NET4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTL9Q8NET4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
RTL9Q8NET4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTL9Q8NET4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
RTL9Q8NET4 AL590627.1-203ENST00000421194 1026 ntBASIC22.43■■□□□ 1.18
RTL9Q8NET4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
RTL9Q8NET4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
RTL9Q8NET4 AL591684.3-201ENST00000605187 298 ntBASIC22.43■■□□□ 1.18
RTL9Q8NET4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
RTL9Q8NET4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTL9Q8NET4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTL9Q8NET4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTL9Q8NET4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
RTL9Q8NET4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.43■■□□□ 1.18
RTL9Q8NET4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC22.43■■□□□ 1.18
RTL9Q8NET4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
RTL9Q8NET4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RTL9Q8NET4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC22.42■■□□□ 1.18
RTL9Q8NET4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RTL9Q8NET4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
RTL9Q8NET4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.42■■□□□ 1.18
RTL9Q8NET4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
RTL9Q8NET4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTL9Q8NET4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTL9Q8NET4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTL9Q8NET4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC22.42■■□□□ 1.18
RTL9Q8NET4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC22.42■■□□□ 1.18
RTL9Q8NET4 AC011467.2-201ENST00000598425 242 ntBASIC22.42■■□□□ 1.18
RTL9Q8NET4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC22.42■■□□□ 1.18
RTL9Q8NET4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTL9Q8NET4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
RTL9Q8NET4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTL9Q8NET4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.42■■□□□ 1.18
RTL9Q8NET4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTL9Q8NET4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTL9Q8NET4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTL9Q8NET4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTL9Q8NET4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTL9Q8NET4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTL9Q8NET4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
RTL9Q8NET4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTL9Q8NET4 RCN1P2-201ENST00000398357 915 ntBASIC22.41■■□□□ 1.18
RTL9Q8NET4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC22.41■■□□□ 1.18
RTL9Q8NET4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
RTL9Q8NET4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
RTL9Q8NET4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
RTL9Q8NET4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
RTL9Q8NET4 AC009533.2-201ENST00000543664 586 ntBASIC22.41■■□□□ 1.18
RTL9Q8NET4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC22.41■■□□□ 1.18
RTL9Q8NET4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC22.41■■□□□ 1.18
RTL9Q8NET4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC22.41■■□□□ 1.18
RTL9Q8NET4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RTL9Q8NET4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTL9Q8NET4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.41■■□□□ 1.18
RTL9Q8NET4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
RTL9Q8NET4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTL9Q8NET4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC22.41■■□□□ 1.18
RTL9Q8NET4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC22.4■■□□□ 1.18
RTL9Q8NET4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RTL9Q8NET4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTL9Q8NET4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTL9Q8NET4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTL9Q8NET4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
RTL9Q8NET4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
RTL9Q8NET4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms