Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CCDC65Q8IXS2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC65Q8IXS2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC65Q8IXS2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC65Q8IXS2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC65Q8IXS2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC65Q8IXS2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC65Q8IXS2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC65Q8IXS2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC65Q8IXS2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 AC073508.3-201ENST00000619697 1419 ntBASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 AC007613.1-201ENST00000572811 2597 ntBASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 PHGDH-209ENST00000641074 1780 ntBASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
CCDC65Q8IXS2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 AL024508.2-201ENST00000607749 1894 ntBASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 LINC01126-201ENST00000623515 1646 ntBASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC65Q8IXS2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC65Q8IXS2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CCDC65Q8IXS2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC65Q8IXS2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
CCDC65Q8IXS2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC65Q8IXS2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CCDC65Q8IXS2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC65Q8IXS2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
CCDC65Q8IXS2 AL096828.2-201ENST00000567259 1965 ntBASIC20.27■□□□□ 0.84
CCDC65Q8IXS2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC65Q8IXS2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC65Q8IXS2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC65Q8IXS2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms