Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CCDC50Q8IVM0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 ESPNP-201ENST00000270691 2015 ntBASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 ABHD17AP1-201ENST00000358206 933 ntBASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 CRYGFP-201ENST00000418459 633 ntBASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 GCSHP5-201ENST00000443090 522 ntBASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 AC113410.3-201ENST00000623366 203 ntBASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 AC141586.5-201ENST00000624546 2050 ntBASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 AC012313.1-201ENST00000593393 3059 ntBASIC19.31■□□□□ 0.68
CCDC50Q8IVM0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 AC099343.3-201ENST00000605834 2503 ntBASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 MIR564-202ENST00000385049 94 ntBASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 AC012618.2-201ENST00000428058 849 ntBASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 AL355355.2-201ENST00000442321 338 ntBASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 REXO1L10P-201ENST00000615707 1290 ntBASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 REXO1L12P-201ENST00000622156 912 ntBASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 AL049637.2-201ENST00000641778 930 ntBASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 AC093677.2-201ENST00000600169 1863 ntBASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC50Q8IVM0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms