Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RNF111Q6ZNA4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF111Q6ZNA4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF111Q6ZNA4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF111Q6ZNA4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF111Q6ZNA4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
RNF111Q6ZNA4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF111Q6ZNA4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF111Q6ZNA4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.77■□□□□ 0.44
RNF111Q6ZNA4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RNF111Q6ZNA4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.77■□□□□ 0.44
RNF111Q6ZNA4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF111Q6ZNA4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.77■□□□□ 0.44
RNF111Q6ZNA4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF111Q6ZNA4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
RNF111Q6ZNA4 AP000525.1-201ENST00000608286 694 ntBASIC17.77■□□□□ 0.44
RNF111Q6ZNA4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF111Q6ZNA4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RNF111Q6ZNA4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.77■□□□□ 0.43
RNF111Q6ZNA4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.77■□□□□ 0.43
RNF111Q6ZNA4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RNF111Q6ZNA4 AC138932.1-201ENST00000534164 6830 ntBASIC17.77■□□□□ 0.43
RNF111Q6ZNA4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RNF111Q6ZNA4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 CRYGFP-201ENST00000418459 633 ntBASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 MFAP1P1-201ENST00000442257 1255 ntBASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF111Q6ZNA4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 MIR1238-201ENST00000408483 83 ntBASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 TSPY15P-201ENST00000457163 923 ntBASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 CKBP1-201ENST00000565489 1086 ntBASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 AC096733.2-201ENST00000609937 1394 ntBASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF111Q6ZNA4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms