Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 UPF3AP3-201ENST00000420996 769 ntBASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 AC034105.1-201ENST00000563488 319 ntBASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LYSMD4Q5XG99 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 KRT18P3-201ENST00000451602 1288 ntBASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 RNA5SP415-201ENST00000517246 115 ntBASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 AC010327.4-202ENST00000591484 748 ntBASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 AC025062.2-201ENST00000605477 670 ntBASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD4Q5XG99 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 AC012640.2-201ENST00000561606 901 ntBASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 AC055717.3-201ENST00000622967 595 ntBASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 AC008735.5-201ENST00000623544 497 ntBASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
LYSMD4Q5XG99 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 KRT18P65-201ENST00000439811 1286 ntBASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 MIR3687-2-201ENST00000577708 61 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms