Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 AL645608.8-201ENST00000606034 2086 ntBASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 LINC01126-201ENST00000623515 1646 ntBASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.24■□□□□ 0.35
LRIF1Q5T3J3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRIF1Q5T3J3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
LRIF1Q5T3J3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LRIF1Q5T3J3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.23■□□□□ 0.35
LRIF1Q5T3J3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LRIF1Q5T3J3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRIF1Q5T3J3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
LRIF1Q5T3J3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRIF1Q5T3J3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRIF1Q5T3J3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRIF1Q5T3J3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRIF1Q5T3J3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.23■□□□□ 0.35
LRIF1Q5T3J3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRIF1Q5T3J3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.23■□□□□ 0.35
LRIF1Q5T3J3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRIF1Q5T3J3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRIF1Q5T3J3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LRIF1Q5T3J3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRIF1Q5T3J3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LRIF1Q5T3J3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRIF1Q5T3J3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 KRT18P23-201ENST00000435622 1283 ntBASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 WWOX-216ENST00000569818 525 ntBASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 AP005242.2-201ENST00000580065 1175 ntBASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 REXO1L10P-201ENST00000615707 1290 ntBASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 REXO1L12P-201ENST00000622156 912 ntBASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.22■□□□□ 0.35
LRIF1Q5T3J3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRIF1Q5T3J3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LRIF1Q5T3J3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRIF1Q5T3J3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRIF1Q5T3J3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LRIF1Q5T3J3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LRIF1Q5T3J3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.21■□□□□ 0.35
LRIF1Q5T3J3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRIF1Q5T3J3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms