Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRK2Q5S007 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 AC023141.5-201ENST00000458585 616 ntBASIC15.78■□□□□ 0.12
LRRK2Q5S007 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRK2Q5S007 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 AC051619.7-201ENST00000568314 623 ntBASIC15.78■□□□□ 0.12
LRRK2Q5S007 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRK2Q5S007 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRK2Q5S007 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRK2Q5S007 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.77■□□□□ 0.12
LRRK2Q5S007 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.77■□□□□ 0.12
LRRK2Q5S007 AC068472.1-201ENST00000474589 881 ntBASIC15.77■□□□□ 0.12
LRRK2Q5S007 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRK2Q5S007 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.77■□□□□ 0.12
LRRK2Q5S007 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRK2Q5S007 AL358472.5-202ENST00000641448 1267 ntBASIC15.77■□□□□ 0.12
LRRK2Q5S007 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.77■□□□□ 0.12
LRRK2Q5S007 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRK2Q5S007 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRK2Q5S007 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRK2Q5S007 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
LRRK2Q5S007 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LRRK2Q5S007 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRK2Q5S007 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRK2Q5S007 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRK2Q5S007 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRK2Q5S007 AP005018.1-201ENST00000525475 301 ntBASIC15.77■□□□□ 0.12
LRRK2Q5S007 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
LRRK2Q5S007 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.77■□□□□ 0.12
LRRK2Q5S007 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRK2Q5S007 AC004835.2-201ENST00000603762 682 ntBASIC15.77■□□□□ 0.12
LRRK2Q5S007 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
LRRK2Q5S007 AL163051.1-201ENST00000569214 1512 ntBASIC15.77■□□□□ 0.11
LRRK2Q5S007 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LRRK2Q5S007 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.77■□□□□ 0.11
LRRK2Q5S007 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.77■□□□□ 0.11
LRRK2Q5S007 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRK2Q5S007 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRK2Q5S007 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
LRRK2Q5S007 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRK2Q5S007 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRK2Q5S007 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRK2Q5S007 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRK2Q5S007 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRK2Q5S007 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.76■□□□□ 0.11
LRRK2Q5S007 TERF1P3-201ENST00000505638 1227 ntBASIC15.76■□□□□ 0.11
LRRK2Q5S007 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRK2Q5S007 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.76■□□□□ 0.11
LRRK2Q5S007 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRK2Q5S007 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.76■□□□□ 0.11
LRRK2Q5S007 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRK2Q5S007 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
LRRK2Q5S007 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRK2Q5S007 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRK2Q5S007 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRK2Q5S007 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.76■□□□□ 0.11
LRRK2Q5S007 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRK2Q5S007 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRK2Q5S007 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRK2Q5S007 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.76■□□□□ 0.11
LRRK2Q5S007 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LRRK2Q5S007 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRK2Q5S007 TSPY16P-201ENST00000449843 468 ntBASIC15.76■□□□□ 0.11
LRRK2Q5S007 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.76■□□□□ 0.11
LRRK2Q5S007 PGM5P2-202ENST00000637225 1043 ntBASIC15.76■□□□□ 0.11
LRRK2Q5S007 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRK2Q5S007 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRK2Q5S007 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LRRK2Q5S007 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRK2Q5S007 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRK2Q5S007 AC112907.3-201ENST00000577781 2400 ntBASIC15.76■□□□□ 0.11
LRRK2Q5S007 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRK2Q5S007 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LRRK2Q5S007 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRK2Q5S007 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
LRRK2Q5S007 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRK2Q5S007 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.75■□□□□ 0.11
LRRK2Q5S007 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.75■□□□□ 0.11
LRRK2Q5S007 AC005593.1-201ENST00000624894 515 ntBASIC15.75■□□□□ 0.11
LRRK2Q5S007 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.75■□□□□ 0.11
LRRK2Q5S007 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRK2Q5S007 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
LRRK2Q5S007 Z98044.1-201ENST00000632503 1764 ntBASIC15.75■□□□□ 0.11
LRRK2Q5S007 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRK2Q5S007 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRK2Q5S007 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRK2Q5S007 PCDHAC2-203ENST00000615316 3011 ntBASIC15.75■□□□□ 0.11
LRRK2Q5S007 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms