Protein–RNA interactions for Protein: Q5GH77

XKR3, XK-related protein 3, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XKR3Q5GH77 LINC00167-201ENST00000530583 1419 ntBASIC20.19■□□□□ 0.82
XKR3Q5GH77 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
XKR3Q5GH77 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.18■□□□□ 0.82
XKR3Q5GH77 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
XKR3Q5GH77 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
XKR3Q5GH77 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
XKR3Q5GH77 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
XKR3Q5GH77 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
XKR3Q5GH77 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
XKR3Q5GH77 AC246785.2-201ENST00000432512 513 ntBASIC20.18■□□□□ 0.82
XKR3Q5GH77 NUS1P1-201ENST00000446295 882 ntBASIC20.18■□□□□ 0.82
XKR3Q5GH77 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
XKR3Q5GH77 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.18■□□□□ 0.82
XKR3Q5GH77 AC011840.4-201ENST00000578471 627 ntBASIC20.18■□□□□ 0.82
XKR3Q5GH77 Z69720.1-201ENST00000601483 472 ntBASIC20.18■□□□□ 0.82
XKR3Q5GH77 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.18■□□□□ 0.82
XKR3Q5GH77 AC012313.10-201ENST00000623509 926 ntBASIC20.18■□□□□ 0.82
XKR3Q5GH77 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.18■□□□□ 0.82
XKR3Q5GH77 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
XKR3Q5GH77 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
XKR3Q5GH77 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.18■□□□□ 0.82
XKR3Q5GH77 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
XKR3Q5GH77 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
XKR3Q5GH77 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
XKR3Q5GH77 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
XKR3Q5GH77 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
XKR3Q5GH77 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
XKR3Q5GH77 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
XKR3Q5GH77 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.17■□□□□ 0.82
XKR3Q5GH77 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
XKR3Q5GH77 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
XKR3Q5GH77 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
XKR3Q5GH77 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
XKR3Q5GH77 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
XKR3Q5GH77 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
XKR3Q5GH77 AL845331.1-201ENST00000424978 1190 ntBASIC20.17■□□□□ 0.82
XKR3Q5GH77 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
XKR3Q5GH77 VENTXP7-201ENST00000475503 772 ntBASIC20.17■□□□□ 0.82
XKR3Q5GH77 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.17■□□□□ 0.82
XKR3Q5GH77 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.17■□□□□ 0.82
XKR3Q5GH77 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
XKR3Q5GH77 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.17■□□□□ 0.82
XKR3Q5GH77 PRELID1P1-202ENST00000567272 903 ntBASIC20.17■□□□□ 0.82
XKR3Q5GH77 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
XKR3Q5GH77 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.17■□□□□ 0.82
XKR3Q5GH77 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.17■□□□□ 0.82
XKR3Q5GH77 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
XKR3Q5GH77 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.17■□□□□ 0.82
XKR3Q5GH77 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.17■□□□□ 0.82
XKR3Q5GH77 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.17■□□□□ 0.82
XKR3Q5GH77 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
XKR3Q5GH77 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
XKR3Q5GH77 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.17■□□□□ 0.82
XKR3Q5GH77 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.17■□□□□ 0.82
XKR3Q5GH77 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.17■□□□□ 0.82
XKR3Q5GH77 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
XKR3Q5GH77 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
XKR3Q5GH77 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.17■□□□□ 0.82
XKR3Q5GH77 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
XKR3Q5GH77 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.16■□□□□ 0.82
XKR3Q5GH77 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
XKR3Q5GH77 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
XKR3Q5GH77 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
XKR3Q5GH77 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
XKR3Q5GH77 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
XKR3Q5GH77 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
XKR3Q5GH77 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
XKR3Q5GH77 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
XKR3Q5GH77 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
XKR3Q5GH77 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
XKR3Q5GH77 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.16■□□□□ 0.82
XKR3Q5GH77 KRT18P65-201ENST00000439811 1286 ntBASIC20.16■□□□□ 0.82
XKR3Q5GH77 AC068472.1-201ENST00000474589 881 ntBASIC20.16■□□□□ 0.82
XKR3Q5GH77 AC104819.1-201ENST00000504587 486 ntBASIC20.16■□□□□ 0.82
XKR3Q5GH77 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.16■□□□□ 0.82
XKR3Q5GH77 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.16■□□□□ 0.82
XKR3Q5GH77 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
XKR3Q5GH77 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.16■□□□□ 0.82
XKR3Q5GH77 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
XKR3Q5GH77 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
XKR3Q5GH77 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
XKR3Q5GH77 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.16■□□□□ 0.82
XKR3Q5GH77 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.16■□□□□ 0.82
XKR3Q5GH77 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
XKR3Q5GH77 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.16■□□□□ 0.82
XKR3Q5GH77 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.16■□□□□ 0.82
XKR3Q5GH77 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
XKR3Q5GH77 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
XKR3Q5GH77 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
XKR3Q5GH77 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.16■□□□□ 0.82
XKR3Q5GH77 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
XKR3Q5GH77 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
XKR3Q5GH77 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
XKR3Q5GH77 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
XKR3Q5GH77 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
XKR3Q5GH77 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
XKR3Q5GH77 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
XKR3Q5GH77 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
XKR3Q5GH77 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
XKR3Q5GH77 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms